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remove unrequired params
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dorien-er committed Jan 30, 2024
1 parent 75533f9 commit 0f7d03a
Showing 1 changed file with 0 additions and 5 deletions.
5 changes: 0 additions & 5 deletions src/busco/busco/script.sh
Original file line number Diff line number Diff line change
Expand Up @@ -44,16 +44,11 @@ busco \
${par_metaeuk_parameters:+--metaeuk_parameters "$par_metaeuk_parameters"} \
${par_metaeuk_rerun_parameters:+--metaeuk_rerun_parameters "$par_metaeuk_rerun_parameters"} \
${par_miniprot:+--miniprot} \
${par_offline:+--offline} \
${par_opt_out_run_stats:+--opt-out-run-stats} \
${par_quiet:+--quiet} \
${par_restart:+--restart} \
${par_scaffold_composition:+--scaffold_composition} \
${par_tar:+--tar} \
${par_download_base_url:+--download_base_url "$par_download_base_url"} \
${par_download_path:+--download_path "$par_download_path"} \
${par_download:+--download "$par_download"}



out_dir=$(find "$tmp_dir/$prefix" -maxdepth 1 -name 'run_*')
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