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vgl-hub

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  1. gfastats gfastats Public

    A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.

    C++ 94 9

  2. gfastar gfastar Public

    A tool suite for genome assembly evaluation and manipulation

    C++ 5

  3. teloscope teloscope Public

    A universal telomere annotation tool for genome assemblies in [.fa][.gz] format

    C++ 2

  4. gnome_seeker gnome_seeker Public

    Python 1

  5. rdeval rdeval Public

    Multithreaded read analysis

    C++ 1 1

  6. gfalibs gfalibs Public

    general purpose library for sequence manipulation

    C++ 1 3

Repositories

Showing 10 of 16 repositories
  • rdeval Public

    Multithreaded read analysis

    vgl-hub/rdeval’s past year of commit activity
    C++ 1 MIT 1 0 0 Updated Dec 17, 2024
  • gfalibs Public

    general purpose library for sequence manipulation

    vgl-hub/gfalibs’s past year of commit activity
    C++ 1 MIT 3 0 0 Updated Dec 16, 2024
  • gfastats Public

    A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.

    vgl-hub/gfastats’s past year of commit activity
    C++ 94 MIT 9 1 0 Updated Dec 10, 2024
  • teloscope Public

    A universal telomere annotation tool for genome assemblies in [.fa][.gz] format

    vgl-hub/teloscope’s past year of commit activity
    C++ 2 MIT 0 0 0 Updated Dec 10, 2024
  • kcount Public

    A kmer counting tool

    vgl-hub/kcount’s past year of commit activity
    C++ 1 MIT 0 0 0 Updated Dec 5, 2024
  • data-wrangling Public

    VGL data wrangling

    vgl-hub/data-wrangling’s past year of commit activity
    Python 0 0 0 0 Updated Aug 22, 2024
  • app_template Public

    a template for gfastar tools

    vgl-hub/app_template’s past year of commit activity
    C++ 0 MIT 2 0 0 Updated Aug 7, 2024
  • kreeq Public

    Kmer-based consensus accuracy tool

    vgl-hub/kreeq’s past year of commit activity
    C++ 0 MIT 1 0 0 Updated Aug 7, 2024
  • gfalign Public

    Assembly graph read alignment and analysis

    vgl-hub/gfalign’s past year of commit activity
    C++ 0 MIT 1 0 0 Updated Aug 5, 2024
  • randseq Public Forked from vgl-hub/app_template

    A tool to generate random reference and matched read sequences

    vgl-hub/randseq’s past year of commit activity
    C++ 0 MIT 2 0 0 Updated Jun 8, 2024
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