Discussions

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  gARG as beautiful equivalence classes of hyper-exhaustive math accounting of unknowable reality

  castedo started Dec 1, 2023 in Show and tell

  

  

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  Questionable unsuitability of standard math formalism

  castedo started Nov 29, 2023 in General

  

  

  

  

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  Using GitHub discussions and issues for public preprint feedback

  castedo started Nov 29, 2023 in Ideas

  

  

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  Positive feedback on specific passages

  castedo started Nov 29, 2023 in General

  

  

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  Rename "Big" ARG to "pedigree" ARG?

  jeromekelleher started Dec 7, 2022 in General

  

  

  

  

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  "Unary" and "pass through" nodes.

  hyanwong started Dec 7, 2022 in General

  

  

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  Nodes as events vs genomes, and timings

  hyanwong started Feb 10, 2022 in General

  

  

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  NODE_IS_RE_PARENT and NODE_IS_RE_CHILD

  hyanwong started Nov 16, 2022 in Ideas

  

  

  

  

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  Recombination must be encoded with two nodes

  jeromekelleher started Jan 23, 2022 in General

  

  

  

  

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  Title

  jeromekelleher started Jan 12, 2022 in General

  

  

  

  

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  Figure 1: is it too early / needed in main text

  hyanwong started Apr 4, 2022 in General

  

  

  

  

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  What the args looks like without explicit recombinations

  hyanwong started Apr 1, 2022 in General

  

  

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  Target audience

  jeromekelleher started Jan 10, 2022 in General

  

  

  

  

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  Presentation

  hyanwong started Mar 27, 2022 in Show and tell

  

  

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  Hudson 1983, & gametes

  hyanwong started Mar 15, 2022 in Ideas

  

  

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  Definitions and terminology

  jeromekelleher started Jan 10, 2022 in General

  

  

  

  

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  Simplify(filter_nodes=False)

  hyanwong asked Feb 11, 2022 in Q&A · Unanswered

  

  

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  ARGs and SPRs

  jeromekelleher started Feb 8, 2022 in General

  

  

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  Standard node classification in the ARG shares limitations of the CwR

  jeromekelleher started Jan 27, 2022 in General

  

  

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  Review of ARG inference methods

  jeromekelleher started Jan 10, 2022 in General

  

  

  

  

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  Complete ARGs must keep *all* ancestors

  jeromekelleher started Feb 5, 2022 in General

  

  

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  Explanatory illustrations

  jeromekelleher started Jan 10, 2022 in General

  

  

  

  

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  Review of ancestral graphs from a theoretical perspective

  jeromekelleher started Jan 10, 2022 in General

  

  

  

  

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