Add citation bibliography

docs/Project.toml

@@ -1,11 +1,13 @@
 [deps]
 Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
+DocumenterCitations = "daee34ce-89f3-4625-b898-19384cb65244"
 OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
 PointNeighbors = "1c4d5385-0a27-49de-8e2c-43b175c8985c"
 TrixiBase = "9a0f1c46-06d5-4909-a5a3-ce25d3fa3284"
 
 [compat]
 Documenter = "1"
+DocumenterCitations = "1"
 OrdinaryDiffEq = "6"
 PointNeighbors = "0.4"
 TrixiBase = "0.1"

docs/make.jl

@@ -1,4 +1,4 @@
-using Documenter
+using Documenter, DocumenterCitations
 using TrixiParticles
 using TrixiBase
 using PointNeighbors
@@ -90,7 +90,10 @@ copy_file("NEWS.md")
 # Define module-wide setups such that the respective modules are available in doctests
 DocMeta.setdocmeta!(TrixiParticles, :DocTestSetup, :(using TrixiParticles); recursive=true)
 
+bib = CitationBibliography(joinpath(@__DIR__, "src", "refs.bib"))
+
 makedocs(sitename="TrixiParticles.jl",
+ plugins=[bib],
  # Run doctests and check docs for the following modules
  modules=[TrixiParticles],
  format=Documenter.HTML(),
@@ -139,6 +142,7 @@ makedocs(sitename="TrixiParticles.jl",
  "Contributing" => "contributing.md",
  "Code of Conduct" => "code_of_conduct.md",
  "License" => "license.md",
+ "References" => "references.md",
  ])
 
 deploydocs(repo="github.com/trixi-framework/TrixiParticles.jl",

docs/src/preprocessing/preprocessing.md

@@ -16,12 +16,3 @@ Pages = [joinpath("preprocessing", "point_in_poly", "winding_number_jacobson.jl"
 Modules = [TrixiParticles]
 Pages = [joinpath("preprocessing", "geometries", "io.jl")]
 ```
-
-
-### [References](@id references_complex_shape)
-- Alec Jacobson, Ladislav Kavan, and Olga Sorkine-Hornung "Robust inside-outside segmentation using generalized winding numbers".
- In: ACM Transactions on Graphics, 32.4 (2013), pages 1--12.
- [doi: 10.1145/2461912.2461916](https://igl.ethz.ch/projects/winding-number/robust-inside-outside-segmentation-using-generalized-winding-numbers-siggraph-2013-jacobson-et-al.pdf)
-- Kai Horman, Alexander Agathos "The point in polygon problem for arbitrary polygons".
- In: Computational Geometry, 20.3 (2001), pages 131--144.
- [doi: 10.1016/s0925-7721(01)00012-8](https://doi.org/10.1016/S0925-7721(01)00012-8)

docs/src/references.md

@@ -0,0 +1,2 @@
+```@bibliography
+```