MueLu: Tell aggregate export about Graph and Aggregates #13577

maxfirmbach · 2024-11-05T21:39:54Z

@trilinos/muelu

Motivation

The export of the aggregates triggers the aggregation process several times. This MR fixes the issue by telling the aggregate export, which factory it should use for Graph and Aggregates.

@cgcgcg @jhux2

trilinos-autotester · 2024-11-05T22:00:01Z

Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.

trilinos-autotester · 2024-11-05T22:10:19Z

Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.

trilinos-autotester · 2024-11-05T22:15:53Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

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Using Repos:

Repo: TRILINOS (maxfirmbach/Trilinos)

Pull Request Author: maxfirmbach

trilinos-autotester · 2024-11-06T00:19:24Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs 30 Mins. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

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CDash Test Results for PR# 13577.

Wiki: How to Reproduce PR Testing Builds and Errors.

jhux2 · 2024-11-06T00:42:08Z

error

========================================================
Xpetra::Parameters
 Linear algebra library: Tpetra
Galeri::Xpetra::Parameters<long long>
 Matrix type: Elasticity3D
 Problem size: 1000 (10x10x10)
Processor subdomains in x direction: 1
Processor subdomains in y direction: 1
Processor subdomains in z direction: 1
========================================================
Galeri complete.
========================================================
verbosity = high
number of equations = 3
coarse: max size = 500
multigrid algorithm = unsmoothed
use kokkos refactor = 0
aggregation: type = uncoupled
aggregation: drop scheme = classical
aggregation: drop tol = 0
aggregation: export visualization data = 1
aggregation: output file: agg style = Convex Hulls
aggregation: output file: fine graph edges = 0
aggregation: output file: coarse graph edges = 0
aggregation: output file: build colormap = 0
repartition: enable = 0
aggregation: output filename = MPI-Viz-Output-Elasticity3D-ConvexHulls-Level%LEVELID
max levels = 10   [default]
rap: algorithm = galerkin   [default]
rap: triple product = 1   [unused]


******* WARNING *******
The following parameters were not used:
    rap: triple product = 1   [unused]

Clearing old data (if any)
Replacing coordinate map
Using default factory (SmootherFactory[105]) for building 'Smoother'.
Using default factory (AmalgamationFactory[107]) for building 'UnAmalgamationInfo'.

Level 0
Setup Smoother (MueLu::Ifpack2Smoother{type = RELAXATION})
"Ifpack2::Relaxation": {Initialized: true, Computed: true, Type: Symmetric Gauss-Seidel, sweeps: 1, damping factor: 1, Global matrix dimensions: [3000, 3000], Global nnz: 197568}
Using default factory (SmootherFactory[118]) for building 'Smoother'.
Using default factory (AmalgamationFactory[120]) for building 'UnAmalgamationInfo'.

Level 1
Build (MueLu::TentativePFactory)
Build (MueLu::UncoupledAggregationFactory)
Build (MueLu::CoalesceDropFactory)
Build (MueLu::AmalgamationFactory)
AmalagamationFactory::Build(): found fullblocksize=3 and stridedblocksize=3 from strided maps. offset=0
lightweight wrap = 1
algorithm = "classical" classical algorithm = "default": threshold = 0, blocksize = 3
Level::Set: Not storing "Filtering" generated by factory CoalesceDropFactory[18] on level 0, as it has not been requested and no keep flags were set for it
Detected 0 agglomerated Dirichlet nodes
Number of dropped entries in amalgamated matrix graph: 0/21952 (0%)
Algo "Phase - (Dirichlet)"
BuildAggregatesNonKokkos (Phase - (Dirichlet))
  aggregated : 0 (phase), 0/1000 [0.00%] (total)
  remaining  : 1000
  aggregates : 0 (phase), 0 (total)
Algo "Phase 1 (main)"
BuildAggregatesNonKokkos (Phase 1 (main))
  aggregated : 1000 (phase), 1000/1000 [100.00%] (total)
  remaining  : 0
  aggregates : 64 (phase), 64 (total)
Algo "Phase 2a (secondary)"
BuildAggregatesNonKokkos (Phase 2a (secondary))
  aggregated : 0 (phase), 1000/1000 [100.00%] (total)
  remaining  : 0
  aggregates : 0 (phase), 64 (total)
Algo "Phase 2b (expansion)"
BuildAggregatesNonKokkos (Phase 2b (expansion))
  aggregated : 0 (phase), 1000/1000 [100.00%] (total)
  remaining  : 0
  aggregates : 0 (phase), 64 (total)
Algo "Phase 3 (cleanup)"
BuildAggregatesNonKokkos (Phase 3 (cleanup))
  aggregated : 0 (phase), 1000/1000 [100.00%] (total)
  remaining  : 0
  aggregates : 0 (phase), 64 (total)
Build (MueLu::CoarseMapFactory)
Column map is consistent with the row map, good.
TentativePFactory : aggregates do not cross process boundaries
Level::Set: Not storing "Coordinates" generated by factory TentativePFactory[21] on level 1, as it has not been requested and no keep flags were set for it
Transpose P (MueLu::TransPFactory)
Computing Ac (MueLu::RAPFactory)

******* WARNING *******
Switching from triple product to R x (A x P) since triple product has not been implemented for Cuda
MxM: A x P
MxM: R x (AP) (explicit)
Projections
RAPFactory: call transfer factory: MueLu::AggregationExportFactory
AggregationExportFactory (MueLu::AggregationExportFactory)
AggregationExportFactory: DofsPerNode: 3
AggregationExportFactory: outputfile "MPI-Viz-Output-Elasticity3D-ConvexHulls-Level0.vtu"
RAPFactory: call transfer factory: MueLu::CoordinatesTransferFactory
Build (MueLu::CoordinatesTransferFactory)
Transferring coordinates
MapFactory: coarseCoordMap

p=0: *** Caught standard std::exception of type 'std::runtime_error' :

 Tpetra::Details::WrappedDualView (name = MV::DualView; host use_count = 3; device use_count = 2): Cannot access data on device while a host view is alive
--------------------------------------------------------------------------
Primary job  terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpiexec detected that one or more processes exited with non-zero status, thus causing
the job to be terminated. The first process to do so was:

  Process name: [[51115,1],0]
  Exit code:    1
--------------------------------------------------------------------------

maxfirmbach · 2024-11-06T18:05:45Z

Still WIP.

maxfirmbach · 2024-11-06T18:22:32Z

@jhux2 Tested things with a CUDA build, should work now, thus ready for testing 👍.

trilinos-autotester · 2024-11-06T22:56:57Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

trilinos-autotester · 2024-11-06T22:57:03Z

Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.

trilinos-autotester · 2024-11-06T23:02:05Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

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Using Repos:

Repo: TRILINOS (maxfirmbach/Trilinos)

Pull Request Author: maxfirmbach

trilinos-autotester · 2024-11-07T01:10:41Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: all Jobs PASSED

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CDash Test Results for PR# 13577.

trilinos-autotester · 2024-11-07T01:10:58Z

Status Flag 'Pre-Merge Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
WARNING: NO REVIEWERS HAVE BEEN REQUESTED FOR THIS PULL REQUEST!

trilinos-autotester · 2024-11-07T01:11:05Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

Signed-off-by: maxfirmbach <[email protected]>

trilinos-autotester · 2024-11-07T03:54:12Z

Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.

maxfirmbach · 2024-11-08T00:19:29Z

@jhux2 @cgcgcg This is ready for retesting ... I forgot to sign the commit and had to fix the formatting.

trilinos-autotester · 2024-11-08T03:14:59Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

trilinos-autotester · 2024-11-08T03:15:05Z

Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.

trilinos-autotester · 2024-11-08T03:20:20Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

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Using Repos:

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Pull Request Author: maxfirmbach

trilinos-autotester · 2024-11-08T05:24:08Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: all Jobs PASSED

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CDash Test Results for PR# 13577.

trilinos-autotester · 2024-11-08T05:24:26Z

Status Flag 'Pre-Merge Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
WARNING: NO REVIEWERS HAVE BEEN REQUESTED FOR THIS PULL REQUEST!

trilinos-autotester · 2024-11-08T05:24:33Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2024-11-09T14:09:39Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2024-11-10T14:09:44Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2024-11-11T14:13:04Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

jhux2

lgtm

trilinos-autotester · 2024-11-11T19:33:40Z

Status Flag 'Pre-Merge Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED AND APPROVED by [ jhux2 ]!

trilinos-autotester · 2024-11-11T19:33:47Z

Status Flag 'Pull Request AutoTester' - AutoMerge IS ENABLED, but the Label AT: AUTOMERGE is not set. Either set Label AT: AUTOMERGE or manually merge the PR...

maxfirmbach requested a review from a team as a code owner November 5, 2024 21:39

maxfirmbach force-pushed the Set-factory-more-specifically-for-aggregate-export branch from ae0a50c to 20eb606 Compare November 5, 2024 21:42

jhux2 added pkg: MueLu AT: PRE-TEST INSPECTED Required to test outside contributions. This label alone will not allow a PR to merge. labels Nov 5, 2024

trilinos-autotester removed the AT: PRE-TEST INSPECTED Required to test outside contributions. This label alone will not allow a PR to merge. label Nov 5, 2024

jhux2 added AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration AT: PRE-TEST INSPECTED Required to test outside contributions. This label alone will not allow a PR to merge. labels Nov 6, 2024

trilinos-autotester removed the AT: PRE-TEST INSPECTED Required to test outside contributions. This label alone will not allow a PR to merge. label Nov 6, 2024

trilinos-autotester removed the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Nov 7, 2024

Tell aggregate export about Graph and Aggregates

a319a19

Signed-off-by: maxfirmbach <[email protected]>

maxfirmbach force-pushed the Set-factory-more-specifically-for-aggregate-export branch from 1a698f5 to a319a19 Compare November 7, 2024 01:35

cgcgcg added AT: PRE-TEST INSPECTED Required to test outside contributions. This label alone will not allow a PR to merge. AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration labels Nov 8, 2024

trilinos-autotester removed the AT: PRE-TEST INSPECTED Required to test outside contributions. This label alone will not allow a PR to merge. label Nov 8, 2024

trilinos-autotester removed the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Nov 8, 2024

jhux2 approved these changes Nov 11, 2024

View reviewed changes

cgcgcg merged commit 67c25f4 into trilinos:develop Nov 11, 2024
10 of 16 checks passed

MueLu: Tell aggregate export about Graph and Aggregates #13577

MueLu: Tell aggregate export about Graph and Aggregates #13577

Conversation

maxfirmbach commented Nov 5, 2024

Motivation

trilinos-autotester commented Nov 5, 2024

trilinos-autotester commented Nov 5, 2024

trilinos-autotester commented Nov 5, 2024

Build Information

Test Name: PR_gcc-openmpi-openmp

Jenkins Parameters

Build Information

Test Name: PR_gcc

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Build Information

Test Name: PR_gcc-openmpi_debug

Jenkins Parameters

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Test Name: PR_clang

Jenkins Parameters

Build Information

Test Name: Trilinos_PR_python3

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Build Information

Test Name: PR_cuda

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Build Information

Test Name: PR_intel

Jenkins Parameters

Build Information

Test Name: PR_cuda-uvm

Jenkins Parameters

Using Repos:

trilinos-autotester commented Nov 6, 2024

Build Information

Test Name: PR_gcc-openmpi-openmp

Jenkins Parameters

Build Information

Test Name: PR_gcc

Jenkins Parameters

Build Information

Test Name: PR_gcc-openmpi_debug

Jenkins Parameters

Build Information

Test Name: PR_clang

Jenkins Parameters

Build Information

Test Name: Trilinos_PR_python3

Jenkins Parameters

Build Information

Test Name: PR_cuda

Jenkins Parameters

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Test Name: PR_intel

Jenkins Parameters

Build Information

Test Name: PR_cuda-uvm

Jenkins Parameters

jhux2 commented Nov 6, 2024

maxfirmbach commented Nov 6, 2024

maxfirmbach commented Nov 6, 2024

trilinos-autotester commented Nov 6, 2024

trilinos-autotester commented Nov 6, 2024

trilinos-autotester commented Nov 6, 2024

Build Information

Test Name: PR_gcc-openmpi-openmp

Jenkins Parameters

Build Information

Test Name: PR_gcc

Jenkins Parameters

Build Information

Test Name: PR_gcc-openmpi_debug

Jenkins Parameters

Build Information

Test Name: PR_clang

Jenkins Parameters

Build Information

Test Name: Trilinos_PR_python3

Jenkins Parameters

Build Information