Use an alt location for now.

tractometry · Nov 11, 2024 · 1b5a87b · 1b5a87b
1 parent e3d43fe
commit 1b5a87b
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Showing 3 changed files with 9 additions and 7 deletions.
diff --git a/binder/requirements.txt b/binder/requirements.txt
@@ -1,6 +1,6 @@
 repo2data>=2.6.0
 jupyter-book==0.14.0
 afqinsight==0.6.1
-pyAFQ[all]==1.3.5
-
-
+pyAFQ==1.3.5
+plotly==5.3.0
+trx-python==0.3
diff --git a/content/01-pyafq.ipynb b/content/01-pyafq.ipynb
@@ -52,8 +52,9 @@
     "\n",
     "pwd = op.dirname(os.getcwd())\n",
     "\n",
-    "os.environ[\"DIPY_HOME\"] = op.join(pwd, \"..\", \"data\", \"tractometry\")\n",
-    "os.environ[\"AFQ_HOME\"] = op.join(pwd, \"..\", \"data\", \"tractometry\")\n",
+    "os.environ[\"TEMPLATEFLOW_HOME\"] = op.join(pwd, \"..\", \"data_\", \"tractometry\")\n",
+    "os.environ[\"DIPY_HOME\"] = op.join(pwd, \"..\", \"data_\", \"tractometry\")\n",
+    "os.environ[\"AFQ_HOME\"] = op.join(pwd, \"..\", \"data_\", \"tractometry\")\n",
     "\n",
     "import matplotlib.pyplot as plt\n",
     "import nibabel as nib\n",

diff --git a/content/download_data.py b/content/download_data.py
@@ -4,8 +4,9 @@
 import os
 import os.path as op
 pwd = os.getcwd()
-os.environ["DIPY_HOME"] = op.join(pwd, "..", "data", "tractometry")
-os.environ["AFQ_HOME"] = op.join(pwd, "..", "data", "tractometry")
+os.environ["TEMPLATEFLOW_HOME"] = op.join(pwd, "..", "data_", "tractometry")
+os.environ["DIPY_HOME"] = op.join(pwd, "..", "data_", "tractometry")
+os.environ["AFQ_HOME"] = op.join(pwd, "..", "data_", "tractometry")
 
 # Stanford HARDI
 import AFQ.data.fetch as afd