Require ray.

tractometry · Nov 11, 2024 · 0fd2454 · 0fd2454
1 parent c7e0c6d
commit 0fd2454
Show file tree

Hide file tree

Showing 3 changed files with 3 additions and 2 deletions.
diff --git a/binder/requirements.txt b/binder/requirements.txt
@@ -2,5 +2,6 @@ repo2data>=2.6.0
 jupyter-book==0.14.0
 afqinsight==0.6.1
 pyAFQ==1.3.5
+ray
 plotly==5.3.0
 trx-python==0.3
diff --git a/content/01-pyafq.ipynb b/content/01-pyafq.ipynb
@@ -98,7 +98,7 @@
    "outputs": [],
    "source": [
     "myafq = GroupAFQ(\n",
-    "    bids_path=op.join('..', 'data', 'tractometry', 'stanford_hardi'),\n",
+    "    bids_path=op.join('..', 'data_', 'tractometry', 'stanford_hardi'),\n",
     "    preproc_pipeline='vistasoft',\n",
     "    tracking_params=tracking_params,\n",
     "    viz_backend_spec='plotly_no_gif')"

diff --git a/content/download_data.py b/content/download_data.py
@@ -17,7 +17,7 @@
 afd.fetch_templates()
 afd.fetch_pediatric_templates()
 tflow.get('MNI152NLin2009cAsym',
-          resolution=resolution,
+          resolution=1,
           desc='brain',
           suffix='mask')