[ENH/FIX] Pyafq file outputs more folders, more BIDS #177

	name: Test suite

	on: [push, pull_request]

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	build:

	runs-on: ubuntu-latest
	strategy:
	max-parallel: 4
	matrix:
	python-version: ["3.9", "3.10", "3.11"]
	nibabel-pre: [true, false]

	steps:
	- name: Checkout repo
	uses: actions/checkout@v1
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v1
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install
	run: \|
	python -m pip install --upgrade pip
	pip install .[all]
	- name: Nibabel pre-release installation
	if: ${{ matrix.nibabel-pre }}
	run: \|
	pip install --pre nibabel
	- name: Check Dependencies
	run: \|
	pipconflictchecker
	- name: Lint
	run: \|
	flake8 --ignore N802,N806,W503 --select W504 `find . -name \*.py \| grep -v setup.py \| grep -v version.py \| grep -v __init__.py \| grep -v /docs/`
	- name: Test
	run: \|
	cd && mkdir for_test && cd for_test && pytest --pyargs AFQ --cov-report term-missing --cov=AFQ -m "not nightly and not nightly_basic and not nightly_custom and not nightly_anisotropic and not nightly_slr and not nightly_pft and not nightly_reco and not nightly_reco80" --durations=0

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