Computational Anatomy Toolbox for SPM12 or SPM25

A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.

This GitHub repository was created for research focusing on the development of deep learning-based segmentation models for fetal brain tissue.

Adversarially Training of Autoencoders for Unsupervised Anomaly Segmentation

U-Net from Scratch for Brain Tumor Segmentation