Decision Intelligence platform for Biological Sequence Searching

Parser and database to index the terpene profile of different strains of Cannabis from online databases

A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.

The U-Net Segmentation plugin for Fiji (ImageJ)

An implementation of MNN (Mutual Nearest Neighbors) correct in python.

Phigaro is a scalable command-line tool for predicting phages and prophages

Accelerate data driven research on embryos with deep learning models 🔬

PETAL (ParallEl paThways AnaLyzer): a Python tool for deep biological pathway analysis

GCModeller: genomics CAD(Computer Assistant Design) Modeller system in .NET language

Nucleic and amino acid primitive types

Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.

TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data

A python library for advanced lattice light-sheet image analysis

Neural networks for amino acid sequences

A Pure-Python parser of HMMER3 output

PHOsphoproteomic dissecTiOn using Networks

Kaggle Competitions: Find the nuclei in divergent images to advance medical discovery

Collection of statistical scripts, image analysis workflows, data used in publications by the Misteli Lab.

Digital filtering of a ECG signal

Deep Learning Library for Spot Detection