Fix deprecated Pandas syntax (up to v2.2.2) #58
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python package | |
| on: | |
| push: | |
| branches: [ "main" ] | |
| pull_request: | |
| branches: [ "main" ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.9", "3.10"] | |
| include: | |
| - python-version: "3.10" | |
| coverage: 1 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'pip' | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install flake8 pytest | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --statistics | |
| - name: Type check with pyright | |
| run: | | |
| pyright tableone | |
| - name: Test with pytest | |
| run: | | |
| pytest -vv --cov-report term-missing --cov tableone | tee coverage-report-${{ matrix.python-version }}.txt | |
| - name: Upload pytest test results | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: coverage-report | |
| path: coverage-report-${{ matrix.python-version }}.txt | |
| # Use always() to always run this step to publish test results when there are test failures | |
| if: ${{ always() }} | |
| - name: Generate coverage badge | |
| if: ${{ matrix.coverage }} | |
| run: | | |
| value=$(awk '$1 == "TOTAL" {print $NF+0}' coverage-report-${{ matrix.python-version }}.txt) | |
| anybadge --value=$value --file coverage.svg coverage |