README

Minimum Python version needed: 3.5

Building and (optional) Setting up virtual environment

1. "git clone --recursive [email protected]:EBIvariation/eva-cttv-pipeline.git"
2. "cd eva-cttv-pipeline"
3. [OPTIONAL] "virtualenv -p python3.5 venv"
4. [OPTIONAL] "source venv/bin/activate" ("venv/bin/deactivate" to deactivate virtualenv)
5. pip install -r requirements.txt
6. And then one of:
   • To install: "python3 setup.py install"
   • To install to develop: "python3 setup.py develop"
   • To build a source distribution: "python3 setup.py sdist"

Usage

Please see the GitHub wiki for usage