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v0.2.3
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tobiasrausch committed Mar 6, 2020
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Expand Up @@ -37,7 +37,7 @@ For paired-end data you can run Read1 and Read2 in parallel and then concatenate

# Paired-end mode

For certain downstream applications, you may want to retain proper paired-ends.
For certain downstream applications you may want to retain proper paired-ends. The paired-end mode of the filter subcommand is:

`rdxon filter -x kmer.x.map -y kmer.y.map -o <outprefix> <read1.fq.gz> <read2.fq.gz>`

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