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{"documenter":{"julia_version":"1.10.4","generation_timestamp":"2024-08-25T13:08:26","documenter_version":"1.6.0"}}
{"documenter":{"julia_version":"1.10.4","generation_timestamp":"2024-08-26T06:44:06","documenter_version":"1.6.0"}}
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<html lang="en"><head><meta charset="UTF-8"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><title>Home · Maxnet.jl</title><meta name="title" content="Home · Maxnet.jl"/><meta property="og:title" content="Home · Maxnet.jl"/><meta property="twitter:title" content="Home · Maxnet.jl"/><meta name="description" content="Documentation for Maxnet.jl."/><meta property="og:description" content="Documentation for Maxnet.jl."/><meta property="twitter:description" content="Documentation for Maxnet.jl."/><meta property="og:url" content="https://tiemvanderdeure.github.io/Maxnet.jl/"/><meta property="twitter:url" content="https://tiemvanderdeure.github.io/Maxnet.jl/"/><link rel="canonical" href="https://tiemvanderdeure.github.io/Maxnet.jl/"/><script data-outdated-warner src="assets/warner.js"></script><link href="https://cdnjs.cloudflare.com/ajax/libs/lato-font/3.0.0/css/lato-font.min.css" rel="stylesheet" type="text/css"/><link 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class="docs-search-query input is-rounded is-small is-clickable my-2 mx-auto py-1 px-2" id="documenter-search-query">Search docs (Ctrl + /)</button><ul class="docs-menu"><li class="is-active"><a class="tocitem" href>Home</a></li><li><span class="tocitem">Usage</span><ul><li><a class="tocitem" href="usage/quickstart/">Quick start</a></li><li><a class="tocitem" href="usage/mlj/">MLJ</a></li></ul></li><li><a class="tocitem" href="reference/api/">API reference</a></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><a class="docs-sidebar-button docs-navbar-link fa-solid fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Home</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Home</a></li></ul></nav><div class="docs-right"><a class="docs-navbar-link" href="https://github.com/tiemvanderdeure/Maxnet.jl/blob/master/docs/src/index.md#" title="Edit source on GitHub"><span class="docs-icon fa-solid"></span></a><a class="docs-settings-button docs-navbar-link fa-solid fa-gear" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-article-toggle-button fa-solid fa-chevron-up" id="documenter-article-toggle-button" href="javascript:;" title="Collapse all docstrings"></a></div></header><article class="content" id="documenter-page"><h1 id="Maxnet"><a class="docs-heading-anchor" href="#Maxnet">Maxnet</a><a id="Maxnet-1"></a><a class="docs-heading-anchor-permalink" href="#Maxnet" title="Permalink"></a></h1><p><a href="https://tiemvanderdeure.github.io/Maxnet.jl/stable/"><img src="https://img.shields.io/badge/docs-stable-blue.svg" alt="Stable"/></a> <a href="https://tiemvanderdeure.github.io/Maxnet.jl/dev/"><img src="https://img.shields.io/badge/docs-dev-blue.svg" alt="Dev"/></a> <a href="https://github.com/tiemvanderdeure/Maxnet.jl/actions/workflows/CI.yml?query=branch%3Amaster"><img src="https://github.com/tiemvanderdeure/Maxnet.jl/actions/workflows/CI.yml/badge.svg?branch=master" alt="Build Status"/></a> <a href="https://codecov.io/gh/tiemvanderdeure/Maxnet.jl"><img src="https://codecov.io/gh/tiemvanderdeure/Maxnet.jl/branch/master/graph/badge.svg" alt="Coverage"/></a></p><p>This is a Julia implementation of the <a href="https://github.com/mrmaxent/maxnet">maxnet algorithm</a>, with all core functionality in the original R package.</p><p>Maxnet transforms input data in various ways and then uses the GLMnet algorithm to fit a lasso path, selecting the best variables and transformations.</p><p>Maxnet is closely related to the Java MaxEnt application, which is widely used in species distribution modelling. It was developped by Steven Philips. See <a href="https://doi.org/10.1111/ecog.03049">this publication</a> for more details about maxnet.</p><p>Also see the Maxent page on the site of the <a href="https://biodiversityinformatics.amnh.org/open_source/maxent/">American Museum for Natural History</a>.</p><p>Documentation for <a href="https://github.com/tiemvanderdeure/Maxnet.jl">Maxnet</a>.</p><ul><li><a href="reference/api/#Maxnet.MaxnetBinaryClassifier"><code>Maxnet.MaxnetBinaryClassifier</code></a></li><li><a href="reference/api/#Maxnet.complexity-Tuple{Maxnet.MaxnetModel}"><code>Maxnet.complexity</code></a></li><li><a href="reference/api/#Maxnet.default_features-Tuple{Any}"><code>Maxnet.default_features</code></a></li><li><a href="reference/api/#Maxnet.maxnet-Tuple{BitVector, Any}"><code>Maxnet.maxnet</code></a></li><li><a href="reference/api/#StatsAPI.predict-Tuple{Maxnet.MaxnetModel, Any}"><code>StatsAPI.predict</code></a></li></ul></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="usage/quickstart/">Quick start »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Sunday 25 August 2024 13:08">Sunday 25 August 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
<html lang="en"><head><meta charset="UTF-8"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><title>Home · Maxnet.jl</title><meta name="title" content="Home · Maxnet.jl"/><meta property="og:title" content="Home · Maxnet.jl"/><meta property="twitter:title" content="Home · Maxnet.jl"/><meta name="description" content="Documentation for Maxnet.jl."/><meta property="og:description" content="Documentation for Maxnet.jl."/><meta property="twitter:description" content="Documentation for Maxnet.jl."/><meta property="og:url" content="https://tiemvanderdeure.github.io/Maxnet.jl/"/><meta property="twitter:url" content="https://tiemvanderdeure.github.io/Maxnet.jl/"/><link rel="canonical" href="https://tiemvanderdeure.github.io/Maxnet.jl/"/><script data-outdated-warner src="assets/warner.js"></script><link href="https://cdnjs.cloudflare.com/ajax/libs/lato-font/3.0.0/css/lato-font.min.css" rel="stylesheet" type="text/css"/><link 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data-theme-name="catppuccin-mocha"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/catppuccin-macchiato.css" data-theme-name="catppuccin-macchiato"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/catppuccin-frappe.css" data-theme-name="catppuccin-frappe"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/catppuccin-latte.css" data-theme-name="catppuccin-latte"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/documenter-dark.css" data-theme-name="documenter-dark" data-theme-primary-dark/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/documenter-light.css" data-theme-name="documenter-light" data-theme-primary/><script src="assets/themeswap.js"></script></head><body><div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit"><a href>Maxnet.jl</a></span></div><button class="docs-search-query input is-rounded is-small is-clickable my-2 mx-auto py-1 px-2" id="documenter-search-query">Search docs (Ctrl + /)</button><ul class="docs-menu"><li class="is-active"><a class="tocitem" href>Home</a></li><li><span class="tocitem">Usage</span><ul><li><a class="tocitem" href="usage/quickstart/">Quick start</a></li><li><a class="tocitem" href="usage/mlj/">MLJ</a></li></ul></li><li><a class="tocitem" href="reference/api/">API reference</a></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><a class="docs-sidebar-button docs-navbar-link fa-solid fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Home</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Home</a></li></ul></nav><div class="docs-right"><a class="docs-navbar-link" href="https://github.com/tiemvanderdeure/Maxnet.jl/blob/master/docs/src/index.md#" title="Edit source on GitHub"><span class="docs-icon fa-solid"></span></a><a class="docs-settings-button docs-navbar-link fa-solid fa-gear" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-article-toggle-button fa-solid fa-chevron-up" id="documenter-article-toggle-button" href="javascript:;" title="Collapse all docstrings"></a></div></header><article class="content" id="documenter-page"><h1 id="Maxnet"><a class="docs-heading-anchor" href="#Maxnet">Maxnet</a><a id="Maxnet-1"></a><a class="docs-heading-anchor-permalink" href="#Maxnet" title="Permalink"></a></h1><p><a href="https://tiemvanderdeure.github.io/Maxnet.jl/stable/"><img src="https://img.shields.io/badge/docs-stable-blue.svg" alt="Stable"/></a> <a href="https://tiemvanderdeure.github.io/Maxnet.jl/dev/"><img src="https://img.shields.io/badge/docs-dev-blue.svg" alt="Dev"/></a> <a href="https://github.com/tiemvanderdeure/Maxnet.jl/actions/workflows/CI.yml?query=branch%3Amaster"><img src="https://github.com/tiemvanderdeure/Maxnet.jl/actions/workflows/CI.yml/badge.svg?branch=master" alt="Build Status"/></a> <a href="https://codecov.io/gh/tiemvanderdeure/Maxnet.jl"><img src="https://codecov.io/gh/tiemvanderdeure/Maxnet.jl/branch/master/graph/badge.svg" alt="Coverage"/></a></p><p>This is a Julia implementation of the <a href="https://github.com/mrmaxent/maxnet">maxnet algorithm</a>, with all core functionality in the original R package.</p><p>Maxnet transforms input data in various ways and then uses the GLMnet algorithm to fit a lasso path, selecting the best variables and transformations.</p><p>Maxnet is closely related to the Java MaxEnt application, which is widely used in species distribution modelling. It was developped by Steven Philips. See <a href="https://doi.org/10.1111/ecog.03049">this publication</a> for more details about maxnet.</p><p>Also see the Maxent page on the site of the <a href="https://biodiversityinformatics.amnh.org/open_source/maxent/">American Museum for Natural History</a>.</p><p>Documentation for <a href="https://github.com/tiemvanderdeure/Maxnet.jl">Maxnet</a>.</p><ul><li><a href="reference/api/#Maxnet.MaxnetBinaryClassifier"><code>Maxnet.MaxnetBinaryClassifier</code></a></li><li><a href="reference/api/#Maxnet.complexity-Tuple{Maxnet.MaxnetModel}"><code>Maxnet.complexity</code></a></li><li><a href="reference/api/#Maxnet.default_features-Tuple{Any}"><code>Maxnet.default_features</code></a></li><li><a href="reference/api/#Maxnet.maxnet-Tuple{BitVector, Any}"><code>Maxnet.maxnet</code></a></li><li><a href="reference/api/#StatsAPI.predict-Tuple{Maxnet.MaxnetModel, Any}"><code>StatsAPI.predict</code></a></li></ul></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="usage/quickstart/">Quick start »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Monday 26 August 2024 06:44">Monday 26 August 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
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