| File | Description |
|---|---|
| fix_taxonomy_L7.py | Adds missing fields to a list of taxonomy strings. Used as part of DADA2 pipeline with EzBiocloud database |
| sample_tax.txt | Sample taxonomy file used as input for fix_taxonomy_L7.py |
| tree_midpoint_root.py | Reads in newick tree and roots at the midpoint |
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Python scripts used in conjunction with processing pipelines
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