Skip to content
@talkowski-lab

Talkowski Laboratory

Talkowski Laboratory at Massachusetts General Hospital & The Broad Institute

Popular repositories Loading

  1. gnomad-sv-pipeline gnomad-sv-pipeline Public archive

    Code and custom scripts relevant to gnomAD-SV (Collins*, Brand*, et al., 2020)

    R 36 14

  2. svtk svtk Public archive

    Python 35 12

  3. SV-Adjudicator SV-Adjudicator Public

    Python 25 5

  4. rCNV2 rCNV2 Public

    Aggregation and analyses of rare CNVs across diseases

    R 14 3

  5. Holmes Holmes Public

    Pipeline for structural variation detection from liWGS libraries

    Shell 5

  6. variant-interpretation variant-interpretation Public

    WDL 4 5

Repositories

Showing 10 of 33 repositories
  • annotations Public
    talkowski-lab/annotations’s past year of commit activity
    WDL 0 1 0 0 Updated Jan 3, 2025
  • talkowski-lab/clinical-filtering’s past year of commit activity
    WDL 0 0 0 0 Updated Dec 31, 2024
  • talkowski-lab/variant-interpretation’s past year of commit activity
    WDL 4 5 0 0 Updated Dec 30, 2024
  • dsmap Public
    talkowski-lab/dsmap’s past year of commit activity
    Shell 0 MIT 1 2 0 Updated Dec 21, 2024
  • gCNV-analysis-tools Public

    Analysis tools for gCNV

    talkowski-lab/gCNV-analysis-tools’s past year of commit activity
    R 0 1 2 0 Updated Dec 12, 2024
  • outlier-exclusion Public

    Workflows for filtering gATK-SV callsets

    talkowski-lab/outlier-exclusion’s past year of commit activity
    WDL 0 0 0 0 Updated Nov 15, 2024
  • gatk-sv-internal Public

    Miscellaneous workflows and scripts for GATK-SV

    talkowski-lab/gatk-sv-internal’s past year of commit activity
    WDL 0 0 0 0 Updated Oct 31, 2024
  • athena Public

    Toolkit for structural variation mutation rates and dosage sensitivity

    talkowski-lab/athena’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Oct 8, 2024
  • talkowski-lab/cnv-validation’s past year of commit activity
    WDL 0 1 0 1 Updated Oct 8, 2024
  • SMC_CNN_Model Public

    Pipelines to reproduce analysis result for the SMC new target paper

    talkowski-lab/SMC_CNN_Model’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Jun 23, 2024

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…