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sys-bio · Jun 7, 2024 · 0baf8fe · 0baf8fe
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diff --git a/docs/source/API.rst b/docs/source/API.rst
@@ -1,15 +1,10 @@
 API Documentation
 =================
 
-Analyzer
---------
+check_model Function
+--------------------
 
-.. autoclass:: ratesb_python.analyzer.Analyzer
- :members:
- :undoc-members:
- :show-inheritance:
-
- .. automethod:: check_model(model_str: str, rate_law_classifications_path: str=None, abort_on_complicated_rate_laws: bool=True, excluded_codes: List[int]=[])
+.. automethod:: analyzer.check_model(model_str: str, rate_law_classifications_path: str=None, abort_on_complicated_rate_laws: bool=True, excluded_codes: List[int]=[])
 
  Checks the SBML model for rate law errors and warnings.
 
@@ -24,6 +19,14 @@ Analyzer
 
  The results of the checks as a result object, can be printed or converted to string.
 
+Analyzer
+--------
+
+.. autoclass:: analyzer.Analyzer
+ :members:
+ :undoc-members:
+ :show-inheritance:
+
  .. automethod:: list_all_checks()
 
  Returns a string representation of all the checks.
@@ -100,7 +103,7 @@ Analyzer
 Results
 -------
 
-.. autoclass:: ratesb_python.results.Results
+.. autoclass:: results.Results
  :members:
  :undoc-members:
  :show-inheritance:

diff --git a/docs/source/check_reference.rst b/docs/source/check_reference.rst
@@ -141,6 +141,7 @@ SBOTerm Annotations
  - **Description**: The annotation for Michaelis-Menten kinetics with an explicit enzyme does not follow recommended SBO terms.
  - **Example**: Incorrect SBO term used for Michaelis-Menten kinetics with an explicit enzyme.
  - **Solution**: Use the recommended SBO term for Michaelis-Menten kinetics with an explicit enzyme.
+
 For more details about warnings and errors, please refer to the "View Error Codes" button in `RateSB`_.
 
 .. _RateSB: https://sys-bio.github.io/ratesb/