The output of the command 'writelammpsdata' from the VMD plugin 'topolotools'
can be parsed and parametrized with a CHARMM22 force field (includes TIP3P
water and corrected coefficients for usage within LAMMPS) to run a molecular
dynamics simulation with LAMMPS. A basic LAMMPS input script for running
a simulation is also written and can be used with the corresponding LAMMPS
data file.