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Fix the pipeline to install pygsl (nest#233)
* Merge build and deploy to fix deploy problems * Add nest-server requirements * Fix nest-desktop and compose file * Add v3.7 * Remove test * Add v3.7 to readme * Fix nestml version and add pygsl * Set pygsl to fix version * Fix pygsl problems with numpy v2 * Fix pygsl install
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@@ -21,6 +21,7 @@ RUN apt-get update && apt-get install -y --no-install-recommends \ | |
curl \ | ||
cython3 \ | ||
freeglut3-dev \ | ||
git \ | ||
gosu \ | ||
jq \ | ||
junitparser \ | ||
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@@ -90,7 +91,7 @@ RUN apt-get update && apt-get install -y --no-install-recommends \ | |
wget "https://github.com/nest/nest-simulator/archive/refs/tags/v${NEST_VERSION}.tar.gz" -P ${SRC_PATH} && \ | ||
tar -xzf v${NEST_VERSION}.tar.gz && \ | ||
python3 -m pip install -r ${SRC_PATH}/nest-simulator-${NEST_VERSION}/doc/requirements.txt && \ | ||
python3 -m pip install sphinx_gallery==0.10.1 numpy<2.0dev0 && \ | ||
python3 -m pip install sphinx_gallery==0.10.1 'numpy<=1.26' && \ | ||
chmod +x ${SRC_PATH}/nest-simulator-${NEST_VERSION}/build_support/install_music.sh && \ | ||
${SRC_PATH}/nest-simulator-${NEST_VERSION}/build_support/install_music.sh && \ | ||
mkdir ${SRC_PATH}/nest-build && cd $_ && \ | ||
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@@ -114,12 +115,12 @@ RUN apt-get update && apt-get install -y --no-install-recommends \ | |
make install && \ | ||
python3 -m pip install --upgrade pip setuptools wheel && \ | ||
python3 -m pip install -r ${SRC_PATH}/nest-simulator-${NEST_VERSION}/requirements.txt && \ | ||
python3 -m pip install --upgrade numpy<2.0dev0 && \ | ||
python3 -m pip install --upgrade nest-desktop && \ | ||
python3 -m pip install --upgrade nestml && \ | ||
python3 -m pip install --upgrade scipy && \ | ||
python3 -m pip install --upgrade pygsl | ||
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python3 -m pip install --upgrade gsl wheel setuptools swig && \ | ||
python3 -m pip install --upgrade pygsl@git+https://github.com/pygsl/[email protected] | ||
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COPY entrypoint.sh /usr/local/bin/entrypoint.sh | ||
RUN chmod +x /usr/local/bin/entrypoint.sh | ||
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