Merge pull request #104 from stan-dev/v2.3.0

Version 2.3.0

DESCRIPTION

@@ -1,8 +1,8 @@
 Package: rstantools
 Type: Package
 Title: Tools for Developing R Packages Interfacing with 'Stan'
-Version: 2.2.0.9000
-Date: 2022-04-05
+Version: 2.3.0
+Date: 2023-03-09
 Authors@R:
     c(person(given = "Jonah",
              family = "Gabry",
@@ -53,6 +53,6 @@ Suggests:
     roxygen2 (>= 6.0.1),
     rmarkdown,
     rstudioapi
-RoxygenNote: 7.1.2
+RoxygenNote: 7.2.2
 VignetteBuilder: knitr
 Roxygen: list(markdown = TRUE)

NAMESPACE

@@ -25,5 +25,6 @@ export(prior_summary)
 export(rstan_config)
 export(rstan_create_package)
 export(use_rstan)
+importFrom(RcppParallel,RcppParallelLibs)
 importFrom(stats,quantile)
 importFrom(stats,var)

NEWS.md

@@ -1,6 +1,8 @@
-# rstantools 2.2.9000
+# rstantools 2.3.0
 
-Items for next release go here
+* Updated C++ standard to C++17 (#100)
+* Updated the handling of exporting standalone stan functions in packages for compatibility with the 2.26 (and beyond) versions of StanHeaders and rstan (#101)
+* Added Andrew Johnson (@andrjohns) as an author 
 
 # rstantools 2.2.0
 

R/rstan_config.R

@@ -93,13 +93,13 @@ rstan_config <- function(pkgdir = ".") {
   all_files <- list.files(file.path(pkgdir, "src"), full.names = FALSE)
   # reduce to stan model files
   src_files <- all_files[grepl("*[.](cc|h)$", all_files)]
-  src_files <- src_files[grepl(.stan_prefix(start=TRUE), src_files)]
+  src_files <- src_files[grepl(.stan_prefix(start = TRUE), src_files)]
   # make sure 1st line is "don't edit"
   src_line1 <- sapply(file.path(pkgdir, "src", src_files), readLines, n = 1)
   src_files <- src_files[(src_line1 == .rstantools_noedit("foo.h")) |
                          (src_line1 == .rstantools_noedit("foo.cc"))]
   # stan model names corresponding to inactive stan files
-  rm_names <- gsub(.stan_prefix(start=TRUE), "", src_files)
+  rm_names <- gsub(.stan_prefix(start = TRUE), "", src_files)
   rm_names <- unique(gsub("[.](cc|h)$", "", rm_names))
   rm_names <- rm_names[!(rm_names %in% gsub("[.]stan$", "", stan_files))]
   if (length(rm_names) > 0) {
@@ -355,8 +355,8 @@ rstan_config <- function(pkgdir = ".") {
 .replace_auto <- function(decl_line, next_decl, cppcode, cpp_lines) {
   # Extract the name of function
   fun_name <- paste0(cpp_lines[decl_line:next_decl], collapse = " ")
-  fun_name <- gsub("auto ","",fun_name,fixed=T)
-  fun_name <- sub("\\(.*","",fun_name,perl=T)
+  fun_name <- gsub("auto ", "", fun_name, fixed = TRUE)
+  fun_name <- sub("\\(.*", "", fun_name, perl = TRUE)
 
   # Depending on the version of stanc3, the standalone functions
   # with a plain return type can either be wrapped in a struct as a functor,
@@ -393,5 +393,5 @@ rstan_config <- function(pkgdir = ".") {
   #  type with double
   rtn_type <- gsub("template <typename(.*?)> ", "", repl_dbl)
   # Update model code with type declarations
-  gsub("auto", rtn_type, cpp_lines[decl_line], fixed=T)
+  gsub("auto", rtn_type, cpp_lines[decl_line], fixed = TRUE)
 }

R/rstan_create_package.R

@@ -117,7 +117,6 @@
 #'   on GitHub.
 #' @template seealso-vignettes
 #' @template seealso-get-help
-#' @template seealso-useR2016-video
 #'
 rstan_create_package <- function(path,
                                  fields = NULL,

R/rstantools-package.R

@@ -18,7 +18,8 @@
 #'
 #' @template seealso-vignettes
 #' @template seealso-get-help
-#' @template seealso-useR2016-video
+#'
+#' @importFrom RcppParallel RcppParallelLibs
 #'
 NULL