Convert lists of matrices to draws_array
objects
#653
Workflow file for this run
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on: | |
push: | |
branches: | |
- main | |
- master | |
pull_request: | |
branches: | |
- main | |
- master | |
name: R-CMD-check | |
jobs: | |
R-CMD-check: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: macOS-latest, r: 'devel', suggested_check: TRUE} | |
- {os: macOS-latest, r: 'release', suggested_check: TRUE} | |
- {os: windows-latest, r: 'release', suggested_check: TRUE} | |
- {os: ubuntu-latest, r: 'devel', http-user-agent: "R/4.0.0 (ubuntu-18.04) R (4.0.0 x86_64-pc-linux-gnu x86_64 linux-gnu) on GitHub Actions" , suggested_check: TRUE} | |
- {os: ubuntu-latest, r: 'release', suggested_check: TRUE} | |
- {os: ubuntu-latest, r: 'oldrel', suggested_check: FALSE} | |
- {os: ubuntu-latest, r: '3.6', suggested_check: FALSE} | |
env: | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
_R_CHECK_FORCE_SUGGESTS_: ${{ matrix.config.suggested_check }} | |
steps: | |
- uses: n1hility/cancel-previous-runs@v2 | |
with: | |
token: ${{ secrets.GITHUB_TOKEN }} | |
if: "!startsWith(github.ref, 'refs/tags/') && github.ref != 'refs/heads/master'" | |
- uses: actions/checkout@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- name: Query dependencies | |
run: | | |
install.packages('remotes') | |
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | |
shell: Rscript {0} | |
- name: Cache R packages | |
if: runner.os != 'Windows' | |
uses: actions/cache@v2 | |
with: | |
path: ${{ env.R_LIBS_USER }} | |
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
- name: Install system dependencies | |
if: runner.os == 'Linux' | |
run: | | |
while read -r cmd | |
do | |
eval sudo $cmd | |
done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "18.04"))') | |
- name: Install dependencies | |
run: | | |
remotes::install_deps(dependencies = TRUE) | |
remotes::install_cran(c("rcmdcheck", "caret", "gbm", "randomForest", "e1071")) | |
shell: Rscript {0} | |
- name: Session info | |
run: | | |
options(width = 100) | |
pkgs <- installed.packages()[, "Package"] | |
sessioninfo::session_info(pkgs, include_base = TRUE) | |
shell: Rscript {0} | |
- name: Check | |
env: | |
_R_CHECK_CRAN_INCOMING_: false | |
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") | |
shell: Rscript {0} | |
- name: Show testthat output | |
if: always() | |
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | |
shell: bash | |
- name: Upload check results | |
if: failure() | |
uses: actions/upload-artifact@main | |
with: | |
name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
path: check |