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Update config.yaml
AMRfinderplus workflow #24: Commit 013fded pushed by RAHenriksen
January 23, 2025 13:03 1m 3s main
January 23, 2025 13:03 1m 3s
small updates for species and package for amrfinder tool and db
AMRfinderplus workflow #23: Commit 4de72b7 pushed by RAHenriksen
January 23, 2025 12:53 1m 10s main
January 23, 2025 12:53 1m 10s
update species for running pipeline
AMRfinderplus workflow #22: Commit db63ec5 pushed by RAHenriksen
December 20, 2024 12:51 1m 5s main
December 20, 2024 12:51 1m 5s
updated species
AMRfinderplus workflow #21: Commit ec8d3c3 pushed by RAHenriksen
December 19, 2024 13:13 1m 6s main
December 19, 2024 13:13 1m 6s
changed custom install for db
AMRfinderplus workflow #20: Commit 13b5e89 pushed by RAHenriksen
December 19, 2024 10:49 1m 6s main
December 19, 2024 10:49 1m 6s
adding custom install to update amr database
AMRfinderplus workflow #19: Commit 276c317 pushed by RAHenriksen
December 19, 2024 10:14 1m 4s main
December 19, 2024 10:14 1m 4s
updated files for pipeline
AMRfinderplus workflow #18: Commit 830a0eb pushed by RAHenriksen
December 19, 2024 09:40 1m 8s main
December 19, 2024 09:40 1m 8s
pipeline
AMRfinderplus workflow #17: Commit 5dd72a1 pushed by RAHenriksen
December 16, 2024 09:01 1m 6s main
December 16, 2024 09:01 1m 6s
computerome changes
AMRfinderplus workflow #16: Commit dc437eb pushed by RAHenriksen
December 16, 2024 08:35 1m 9s main
December 16, 2024 08:35 1m 9s
updated pipelien and datadump for mutation and amr report
AMRfinderplus workflow #15: Commit 922ec89 pushed by RAHenriksen
December 10, 2024 12:16 2m 26s main
December 10, 2024 12:16 2m 26s
Merge pull request #1 from ssi-dk/amr_dev
AMRfinderplus workflow #14: Commit d4e5e78 pushed by RAHenriksen
November 21, 2024 14:39 2m 33s main
November 21, 2024 14:39 2m 33s
Amr dev
AMRfinderplus workflow #13: Pull request #1 opened by RAHenriksen
November 21, 2024 14:36 2m 32s amr_dev
November 21, 2024 14:36 2m 32s
update repo name part of conda name within docker environment
AMRfinderplus workflow #12: Commit dc0229b pushed by RAHenriksen
November 21, 2024 14:31 2m 22s amr_dev
November 21, 2024 14:31 2m 22s
added conda environment name in docker to github environment
AMRfinderplus workflow #11: Commit a1bb039 pushed by RAHenriksen
November 21, 2024 14:26 2m 15s amr_dev
November 21, 2024 14:26 2m 15s
install essentials
AMRfinderplus workflow #10: Commit a33435e pushed by RAHenriksen
November 21, 2024 14:18 2m 14s amr_dev
November 21, 2024 14:18 2m 14s
added docker run
AMRfinderplus workflow #9: Commit 643ec7d pushed by RAHenriksen
November 21, 2024 14:10 1m 57s amr_dev
November 21, 2024 14:10 1m 57s
added docker image build
AMRfinderplus workflow #8: Commit 84f9e1e pushed by RAHenriksen
November 21, 2024 14:05 1m 58s amr_dev
November 21, 2024 14:05 1m 58s
minimized workflow to see run error for indentation
AMRfinderplus workflow #7: Commit 04a3eae pushed by RAHenriksen
November 21, 2024 14:00 11s amr_dev
November 21, 2024 14:00 11s
dockerfile and conda environment for workflow
AMRfinderplus workflow #6: Commit 0df9c2e pushed by RAHenriksen
November 21, 2024 13:52 Failure amr_dev
November 21, 2024 13:52 Failure
update
AMRfinderplus workflow #5: Commit 4608bd6 pushed by RAHenriksen
November 21, 2024 13:31 Failure main
November 21, 2024 13:31 Failure
update
AMRfinderplus workflow #4: Commit 4608bd6 pushed by RAHenriksen
November 21, 2024 10:49 Failure main
November 21, 2024 10:49 Failure
change dockerfile
AMRfinderplus workflow #3: Commit e0ce24b pushed by RAHenriksen
November 21, 2024 10:41 Failure main
November 21, 2024 10:41 Failure
make test in docker
AMRfinderplus workflow #2: Commit 2731fcb pushed by RAHenriksen
November 21, 2024 10:38 Failure main
November 21, 2024 10:38 Failure
added md5sum test to ensure amrfinder output
AMRfinderplus workflow #1: Commit 253fd41 pushed by RAHenriksen
November 21, 2024 10:21 55s main
November 21, 2024 10:21 55s