prevent test extras install from overriding dependency versions speci…

…fied in `environment.yaml` (#162)

.github/workflows/test.yaml

@@ -35,25 +35,59 @@ jobs:
  python-version: [ '3.10', '3.11', '3.12' ]
  include:
  - package: acstools
- extras: [ all, test ]
+ test-dependencies: >-
+ matplotlib
+ scipy
+ scikit-image
+ stsci.tools
+ stsci.imagestats
+ photutils
+ dask
+ pytest
+ pytest-astropy-header
+ pytest-remotedata
+ ci-watson 
  pytest-args: --remote-data -v
  - package: asdf
- extras: [ all, tests ]
+ test-dependencies: >-
+ "lz4>=0.10"
+ "fsspec[http]>=2022.8.2"
+ "lz4>=0.10"
+ psutil
+ "pytest>=8"
+ pytest-remotedata
  pytest-args: --remote-data --durations=10
  - package: ccdproc
- extras: [ test ]
+ test-dependencies: >-
+ pytest-astropy>=0.10.0
+ memory_profiler
  pytest-args: -W ignore
  - package: costools
- extras: [ test ]
+ test-dependencies: >-
+ pytest
+ pytest-cov
  - package: jwst
- extras: [ test ]
+ test-dependencies: >-
+ "ci-watson>=0.5.0"
+ "colorama>=0.4.1"
+ "readchar>=3.0"
+ ruff
+ "pytest>=6.0.0"
+ "pytest-cov>=2.9.0"
+ "pytest-doctestplus>=0.10.0"
+ "requests_mock>=1.0"
  crds-observatory: jwst
- #- package: pysynphot
- # extras: [ test ]
+ # - package: pysynphot
+ # test-dependencies: >-
+ # pytest
+ # pytest-remotedata
  - package: reftools
- extras: [ test ]
+ test-dependencies: >-
+ pytest-remotedata
+ pytest-astropy-header
  - package: synphot
- extras: [ test ]
+ test-dependencies: >-
+ pytest-astropy
  - package: wfpc2tools
  exclude:
  - runs-on: macos-13
@@ -65,7 +99,7 @@ jobs:
  - runs-on: macos-latest
  python-version: '3.11'
  runs-on: ${{ matrix.runs-on }}
- name: "`pytest --pyargs ${{ matrix.package }} -n auto ${{ matrix.pytest-args }}` (${{ matrix.runs-on }}, py${{ matrix.python-version }})"
+ name: "`pytest --pyargs ${{ matrix.package }} ${{ matrix.pytest-args }} -n auto` (${{ matrix.runs-on }}, py${{ matrix.python-version }})"
  steps:
  - if: matrix.crds-observatory != ''
  run: |
@@ -91,9 +125,7 @@ jobs:
  cache-environment-key: environment-${{ needs.build.outputs.date }}
  init-shell: none
  generate-run-shell: true
- - if: matrix.extras != ''
- run: pip install "${{ matrix.package }}[${{ join(matrix.extras, ',') }}]"
- - run: pip install pytest-xdist
+ - run: pip install pytest pytest-xdist ${{ matrix.test-dependencies }}
  - run: pip list
  - run: pytest --pyargs ${{ matrix.package }} ${{ matrix.pytest-args }} -n auto 
  test_from_source:
@@ -107,22 +139,33 @@ jobs:
  include:
  - package: calcos
  repository: spacetelescope/calcos
- extras: [ test ]
+ test-dependencies: >-
+ ci-watson
+ pytest
+ pytest-cov
  pytest-args: --slow
  #- package: drizzlepac
  # repository: spacetelescope/drizzlepac
- # extras: [ test ]
+ # test-dependencies: >-
+ # ci_watson
+ # crds
+ # pytest
+ # pytest-remotedata
  - package: hstcal
  repository: spacetelescope/hstcal
- test-dependencies: crds ci_watson
+ test-dependencies: >-
+ crds
+ ci_watson
  pytest-args: --slow
  test-directory: tests
  crds-observatory: hst
  #- package: stistools
  # repository: spacetelescope/stistools
- # - package: stsynphot
- # repository: spacetelescope/stsynphot_refactor
- # extras: [ test ]
+ #- package: stsynphot
+ # repository: spacetelescope/stsynphot_refactor
+ # test-dependencies: >-
+ # pytest-astropy
+ # ci-watson
  exclude:
  - runs-on: macos-13
  python-version: '3.10'
@@ -171,10 +214,7 @@ jobs:
  repository: ${{ matrix.repository }}
  ref: ${{ steps.package_version.outputs.version }}
  fetch-depth: 0
- - if: matrix.extras != ''
- run: pip install -e ".[${{ join(matrix.extras, ',') }}]"
- working-directory: ${{ matrix.package }}
- - run: pip install ${{ matrix.test-dependencies }} pytest pytest-xdist
+ - run: pip install pytest pytest-xdist ${{ matrix.test-dependencies }}
  - run: pip list
  - if: matrix.pre_command != ''
  run: ${{ matrix.pre_command }}
@@ -265,7 +305,7 @@ jobs:
  crds-observatory: hst
  jref: hst/references/hst
  - package: drizzlepac
- run: pytest -n auto tests/test_drizzlepac.py
+ run: pytest tests/test_drizzlepac.py -n auto
  crds-observatory: hst
  jref: hst/references/hst
  exclude:
@@ -309,9 +349,7 @@ jobs:
  cache-environment-key: environment-${{ needs.build.outputs.date }}
  init-shell: none
  generate-run-shell: true
- - if: matrix.extras != ''
- run: pip install ".[${{ join(matrix.extras, ',') }}]"
- - run: pip install pytest-xdist
+ - run: pip install pytest pytest-xdist ${{ matrix.test-dependencies }}
  - run: pip list
  - uses: actions/cache@v4
  with: