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Fixing Notebook Bugs #26

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Fixing Notebook Bugs #26

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9 changes: 5 additions & 4 deletions notebooks/aperture_photometry/aperture_photometry.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -52,6 +52,7 @@
"import asdf\n",
"from astropy.io import fits\n",
"from astropy.table import Table\n",
"import copy\n",
"import matplotlib.pyplot as plt\n",
"import numpy as np\n",
"import photutils\n",
Expand Down Expand Up @@ -103,7 +104,7 @@
}
},
"source": [
"We obtain data from S3 buckets by using `s3fs`. **NOTE THAT THIS PART NEEDS TO BE TESTED ON THE ACTUAL SCIENCE PLATFORM BEFORE MERGING.**"
"We obtain data from S3 buckets by using `s3fs`."
]
},
{
Expand All @@ -128,8 +129,8 @@
"\n",
"with fs.open(asdf_file_uri, 'rb') as f:\n",
" dm = rdm.open(f)\n",
" asdf_file.data.value.copy()\n",
" wcs = asdf_file.meta.wcs.copy()"
" image = dm.data.value.copy()\n",
" wcs = copy.deepcopy(dm.meta.wcs)"
]
},
{
Expand All @@ -149,7 +150,7 @@
"metadata": {},
"outputs": [],
"source": [
"catalog_fname = asdf_dir_uri + 'ROMANISIM/CATALOGS_SCRIPTS/fullcat_101M_pared_ra0.50_dec0.50_WFI01.ecsv'\n",
"catalog_file_uri = asdf_dir_uri + 'ROMANISIM/CATALOGS_SCRIPTS/fullcat_101M_pared_ra0.50_dec0.50_WFI01.ecsv'\n",
"with fs.open(catalog_file_uri) as catalog_file_stream:\n",
" cat = Table.read(catalog_fname)"
]
Expand Down
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