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MRG: switch to importlib.metadata from pkg_resources #546

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merged 2 commits into from
Dec 17, 2024

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@ctb ctb commented Dec 16, 2024

pkg_resources is now deprecated (and in some situations removed), so we should use importlib.metadata instead!

@bluegenes bluegenes merged commit 7b934ee into try-skipmers Dec 17, 2024
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@bluegenes bluegenes deleted the rm_pkgresources branch December 17, 2024 00:07
ctb added a commit that referenced this pull request Dec 21, 2024
* working skipmers, i think!

* test singlesketch skipmers

* add skipmer as moltype option for other commands

* black formatting

* add skipmer test sigs; add fastgather test

* upd

* upd test files

* upd

* fix

* fix2

* try not pinning

* MRG: switch to `importlib.metadata` from `pkg_resources` (#546)

* switch from pkg_resources to importlib.metadata

* black

* need parens for proper selection

* add anydna_size

* update to sourmash prospective v0.18.0

* remove tests for bad zip files 😅

* upd to use py-skipmers

* switch to sourmash latest; add skipmer indexing test

* black formatting

* upd tests

* test for intersect_manifest bug

* fix lint

* fmt python

* cargo fmt

* remove redundant test

* bump to sourmash r0.18.0

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Co-authored-by: C. Titus Brown <[email protected]>
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2 participants