MRG: update docs and -h messages for v0.9.5 release
#364
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This was referenced Jun 19, 2024
bluegenes
approved these changes
Jun 19, 2024
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| The main advantage that `fastmultigather` has over running `fastgather` on multiple queries is that you only load the database files once with `fastmultigather`, which can be a significant time savings for large databases! | ||
| The main advantage that `fastmultigather` has over running `fastgather` on multiple queries is that `fastmultigather` only needs to load the database once for all queries, unlike with `fastgather`; this can be a significant time savings for large databases! | ||
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| #### Output files for `fastmultigather` |
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In this section, should we now add some text on how rocksdb fastmultigather differs (single output file for all results, no prefetch)
Co-authored-by: Tessa Pierce Ward <[email protected]>
…water into update_docs_095
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This PR follows #360 and #361, which fix the gather output to be ~100% sourmash compatible.
This PR:
-h/--helpmessagesindexdoesn't work with a text file list of manifests #347;Fixes #329
Fixes #350
Fixes #362