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MRG: add skipmers; switch to reading frame approach for translation, skipmers #3395

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merged 22 commits into from
Dec 20, 2024

seqtohashes errors instead of panic for frame errors (#3445)

e077599
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Merged

MRG: add skipmers; switch to reading frame approach for translation, skipmers #3395

seqtohashes errors instead of panic for frame errors (#3445)
e077599
Select commit
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Codecov / codecov/project failed Dec 20, 2024 in 1s

86.35% (-0.04%) compared to b69c960

View this Pull Request on Codecov

86.35% (-0.04%) compared to b69c960

Details

Codecov Report

Attention: Patch coverage is 83.82353% with 22 lines in your changes missing coverage. Please review.

Project coverage is 86.35%. Comparing base (b69c960) to head (e077599).

Files with missing lines Patch % Lines
src/core/src/signature.rs 87.37% 13 Missing ⚠️
src/core/src/ffi/minhash.rs 0.00% 5 Missing ⚠️
src/core/src/encodings.rs 66.66% 2 Missing ⚠️
src/core/src/sketch/minhash.rs 0.00% 2 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##           latest    #3395      +/-   ##
==========================================
- Coverage   86.39%   86.35%   -0.04%     
==========================================
  Files         137      137              
  Lines       16125    16195      +70     
  Branches     2219     2219              
==========================================
+ Hits        13931    13985      +54     
- Misses       1887     1903      +16     
  Partials      307      307              

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