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upd readme and cli citation notice
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bluegenes committed Jun 28, 2024
1 parent 0e33cdc commit f3c1391
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -7,7 +7,7 @@ Quickly search, compare, and analyze genomic and metagenomic data sets.
[![Documentation](https://readthedocs.org/projects/sourmash/badge/?version=latest)](http://sourmash.readthedocs.io/en/latest/)
[![Gitter](https://badges.gitter.im/sourmash-bio/community.svg)](https://gitter.im/sourmash-bio/community?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge)

[![DOI](http://joss.theoj.org/papers/10.21105/joss.00027/status.svg)](http://joss.theoj.org/papers/10.21105/joss.00027)
[![DOI](https://joss.theoj.org/papers/10.21105/joss.06830/status.svg)](https://doi.org/10.21105/joss.06830)
[![pyOpenSci](https://tinyurl.com/y22nb8up)](https://github.com/pyOpenSci/software-submission/issues/129)

[![Bioconda install](https://img.shields.io/conda/dn/bioconda/sourmash.svg?style=flag&label=Bioconda)](https://anaconda.org/bioconda/sourmash)
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2 changes: 1 addition & 1 deletion src/sourmash/cli/__init__.py
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Expand Up @@ -55,7 +55,7 @@ def print_citation(cls):
from sourmash.logging import notify

notify(f"\n== This is sourmash version {sourmash.VERSION}. ==")
notify("== Please cite Brown and Irber (2016), doi:10.21105/joss.00027. ==\n")
notify("== Please cite Irber et. al (2024), doi:10.21105/joss.06830. ==\n")

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cls._citation_printed = True

def _subparser_from_name(self, name):
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