This is the repository for pymolschortucts4rna.py. At this point in time, it is best to use pymolschortuctsnobs4.py located here.
Advanced beginers who have started scripting should also consider using the snippet library, pymolsnips. It is available for 18 leading text editors.
The pdf of the slides from my presentation at the wonderful 2019 ConrBelt Regional RNA Symposium at the University of Missouri, Columbia, MO on October 18th can be downloaded from here. Many thanks go to Brenda Peculis and Frank Schmidt for organizing and hosting this fantastic meeting. The poster session was one of the best that I have ever experienced.
The shortcut is listed on the top.
CR: filled rings colored by sequence. There are no presets for nucleic acids under the A pulldown in the internal gui to the right.
Example of a coordinated metal. Use of the pearl effect with the radius of the opaque sphere set to 0.25. Use the code revealed with help NAL as a template.
| Software | Description | Publication. |
|---|---|---|
| nuccyl perl scripts | perl scripts for making nucleic acid cartoons in PyMOL. | 2003 NAR paper |
| dssr_block plugin | for making DSSR block cartoons in which purines are represented as long rectangular blocks and pyrimadines as short rectangular blocks. | 2015 NAR paper |