Pin numpy and cbgen to numpy < 2

sgkit-dev · Jun 19, 2024 · fdc7b7b · fdc7b7b
1 parent 5ad2503
commit fdc7b7b
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Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/requirements-dev.txt b/requirements-dev.txt
@@ -12,7 +12,7 @@ scikit-learn
 partd
 bed-reader
 rechunker
-cbgen; platform_system != "Windows"
+cbgen < 1.0.5; platform_system != "Windows"
 cbgen == 1.0.1; platform_system == "Windows"
 cyvcf2; platform_system != "Windows"
 yarl

diff --git a/requirements.txt b/requirements.txt
@@ -1,4 +1,4 @@
-numpy
+numpy < 2
 xarray
 dask[array] >= 2023.01.0
 distributed >= 2023.01.0

diff --git a/setup.cfg b/setup.cfg
@@ -27,7 +27,7 @@ zip_safe = False  # https://mypy.readthedocs.io/en/latest/installed_packages.htm
 include_package_data = True
 python_requires = >=3.9
 install_requires =
-    numpy
+    numpy < 2
     xarray
     dask[array] >= 2022.01.0
     distributed >= 2022.01.0
@@ -66,7 +66,7 @@ vcf =
     yarl
 bgen =
     rechunker
-    cbgen; platform_system != "Windows"
+    cbgen < 1.0.5; platform_system != "Windows"
     cbgen == 1.0.1; platform_system == "Windows"
 
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