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Use vcf2zarr in GWAS tutorial notebook
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Build docs with Python 3.10

Use %%bash for running vcf2zarr
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tomwhite committed Sep 17, 2024
1 parent 6f7887a commit b5aa42c
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Showing 5 changed files with 14,053 additions and 5,687 deletions.
2 changes: 1 addition & 1 deletion .github/workflows/check-docs.yml
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Expand Up @@ -14,7 +14,7 @@ jobs:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.9"]
python-version: ["3.10"]

steps:
- uses: actions/checkout@v2
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2 changes: 1 addition & 1 deletion .github/workflows/docs.yml
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Expand Up @@ -15,7 +15,7 @@ jobs:
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: '3.9'
python-version: '3.10'
- name: Install dependencies
run: |
sudo apt update -y
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