Use sgkit.distarray for gwas_linear_regression #226

	name: Build GPU

	on:
	workflow_dispatch:
	push:
	branches:
	- main

	jobs:
	build:

	runs-on: "cirun-gpu-runner--${{ github.run_id }}"
	defaults:
	run:
	shell: bash -l {0}
	strategy:
	matrix:
	python-version: ["3.9", "3.10"]

	steps:
	- uses: actions/checkout@v2

	- name: Run Nvidia-smi
	run: \|
	nvidia-smi

	- name: Set up Python
	uses: conda-incubator/[email protected]
	env:
	CONDA: /home/runnerx/miniconda3
	with:
	python-version: ${{ matrix.python-version }}
	miniconda-version: "latest"

	- name: Conda info
	run: \|
	conda info
	conda list

	- name: Installing cudatoolkit and dependencies
	run: \|
	conda install -c nvidia cudatoolkit
	pip install -r requirements.txt -r requirements-dev.txt

	- name: Numba Information
	run: \|
	numba -s

	- name: Run GPU tagged tests
	run: \|
	pytest -m gpu -v

Provide feedback