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Update nf-hello-gatk to match format in hello-gatk training #6

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Update nf-hello-gatk to match format in hello-gatk training #6

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Changes:

  • Uses samplesheet input (with raw Github URLs)
  • Uses file() on reference data objects instead of channels
  • Uses reads_bam as channel name
  • calling_intervals variable becomes intervals

@adamrtalbot
Update nf-hello-gatk to match format in hello-gatk training
b7e8e6e 
Changes:
 - Uses samplesheet input (with raw Github URLs)
 - Uses file() on reference data objects instead of channels
 - Uses reads_bam as channel name
 - calling_intervals variable becomes intervals
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@vdauwera vdauwera Awaiting requested review from vdauwera

@robsyme robsyme Awaiting requested review from robsyme

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