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seanrjohnson committed Jul 10, 2021
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2 changes: 1 addition & 1 deletion README.md
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# Generating novel protein sequences using Gibbs sampling of masked language models

This repository represents the code supporting the work done in [Generating novel protein sequences using Gibbs sampling of masked language models
](https://www.biorxiv.org/content/10.1101/2021.01.26.428322v1.full)
](https://www.biorxiv.org/content/10.1101/2021.01.26.428322v1.full).
Since then, the code has been continuously updated. For the version of the code that was used in that preprint, see: [here](https://github.com/seanrjohnson/protein_gibbs_sampler/tree/v0.1.0)

## Install
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2 changes: 1 addition & 1 deletion setup.py
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requirements = ['torch~=1.8.0', 'fair-esm~=0.3.1', 'pytest', 'tqdm']
setup(
name="pgen",
version="0.1.0",
version="0.2.0",
description="Generating new protein sequence by gibbs sampling masked protein language models",
author="Sean Johnson, Sarah Monaco, Kenneth Massie, Zaid Sayed",
url="https://github.com/seanrjohnson/protein_gibbs_sampler",
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