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Adds ORM for sqla for sdss5db (#224)
* adding apogee schema to post connect reflect * adding init for sdss5db in sqla * adding init orm for targetdb and apogeedb * add schema for opsdb * updating orms * updating some docs * fixing opsdb schema * updating apogee drp * adding init schema of catalogdb * remove duplicate tables, add s to status * adding boss_drp orm * updating docs for boss_drp * linting * fixing linting * remove sqa instrument duplciate * updating array fields in boss * adding a note to revised_magnitude table --------- Co-authored-by: johndonor3 <[email protected]>
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| Original file line number | Diff line number | Diff line change |
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| #!/usr/bin/env python | ||
| # -*- coding: utf-8 -*- | ||
| # | ||
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| # Code generated by: | ||
| # python -m pwiz -e postgresql sdss5db -s boss_drp -i -o -H localhost -p 6000 -u u0857802 | ||
| # Date: September 28, 2023 11:13AM | ||
| # Database: sdss5db | ||
| # Peewee version: 3.15.1 | ||
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| from peewee import (AutoField, BigIntegerField, BlobField, BooleanField, CharField, DateTimeField, | ||
| FloatField, ForeignKeyField, IntegerField, DoubleField, SmallIntegerField) | ||
| from peewee import SQL | ||
| from playhouse.postgres_ext import ArrayField | ||
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| from .. import BaseModel | ||
| from . import database # noqa | ||
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| class BossBase(BaseModel): | ||
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| class Meta: | ||
| schema = 'boss_drp' | ||
| database = database | ||
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| class BossVersion(BossBase): | ||
| id = AutoField() | ||
| ipl = SmallIntegerField(null=True) | ||
| run2d = CharField(null=True) | ||
| run1d = CharField(null=True) | ||
| is_default = BooleanField(null=True) | ||
| is_epoch = BooleanField(null=True) | ||
| is_custom = BooleanField(null=True) | ||
| custom_name = CharField(null=True) | ||
| created = DateTimeField(null=True) | ||
| modified = DateTimeField(constraints=[SQL("DEFAULT now()")], null=True) | ||
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| class Meta: | ||
| table_name = 'boss_version' | ||
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| class BossField(BossBase): | ||
| id = AutoField() | ||
| boss_version = ForeignKeyField(column_name='boss_version_id', field='id', model=BossVersion) | ||
| field = IntegerField(null=True) | ||
| designs = CharField(null=True) | ||
| configs = CharField(null=True) | ||
| mjd = IntegerField(null=True) | ||
| observatory = CharField(null=True) | ||
| run2d = CharField(null=True) | ||
| run1d = CharField(null=True) | ||
| racen = FloatField(null=True) | ||
| deccen = FloatField(null=True) | ||
| epoch = FloatField(null=True) | ||
| cartid = CharField(null=True) | ||
| tai = DoubleField(null=True) | ||
| tai_beg = DoubleField(null=True) | ||
| tai_end = DoubleField(null=True) | ||
| airmass = FloatField(null=True) | ||
| exptime = FloatField(null=True) | ||
| mapname = CharField(null=True) | ||
| tileid = IntegerField(null=True) | ||
| designid = IntegerField(null=True) | ||
| survey = CharField(null=True) | ||
| programname = CharField(null=True) | ||
| chunk = CharField(null=True) | ||
| fieldquality = CharField(null=True) | ||
| fieldsn2 = FloatField(null=True) | ||
| deredsn2 = FloatField(null=True) | ||
| qsurvey = IntegerField(null=True) | ||
| mjdlist = CharField(null=True) | ||
| nexp = IntegerField(null=True) | ||
| nexp_b1 = IntegerField(null=True) | ||
| nexp_r1 = IntegerField(null=True) | ||
| nexp_b2 = IntegerField(null=True) | ||
| nexp_r2 = IntegerField(null=True) | ||
| expt_b1 = FloatField(null=True) | ||
| expt_r1 = FloatField(null=True) | ||
| expt_b2 = FloatField(null=True) | ||
| expt_r2 = FloatField(null=True) | ||
| sn2_g1 = FloatField(null=True) | ||
| sn2_r1 = FloatField(null=True) | ||
| sn2_i1 = FloatField(null=True) | ||
| sn2_g2 = FloatField(null=True) | ||
| sn2_r2 = FloatField(null=True) | ||
| sn2_i2 = FloatField(null=True) | ||
| goffstd = FloatField(null=True) | ||
| grmsstd = FloatField(null=True) | ||
| roffstd = FloatField(null=True) | ||
| rrmsstd = FloatField(null=True) | ||
| ioffstd = FloatField(null=True) | ||
| irmsstd = FloatField(null=True) | ||
| groffstd = FloatField(null=True) | ||
| grrmsstd = FloatField(null=True) | ||
| rioffstd = FloatField(null=True) | ||
| rirmsstd = FloatField(null=True) | ||
| goffgal = FloatField(null=True) | ||
| grmsgal = FloatField(null=True) | ||
| roffgal = FloatField(null=True) | ||
| rrmsgal = FloatField(null=True) | ||
| ioffgal = FloatField(null=True) | ||
| irmsgal = FloatField(null=True) | ||
| groffgal = FloatField(null=True) | ||
| grrmsgal = FloatField(null=True) | ||
| rioffgal = FloatField(null=True) | ||
| rirmsgal = FloatField(null=True) | ||
| nguide = IntegerField(null=True) | ||
| seeing20 = FloatField(null=True) | ||
| seeing50 = FloatField(null=True) | ||
| seeing80 = FloatField(null=True) | ||
| rmsoff20 = FloatField(null=True) | ||
| rmsoff50 = FloatField(null=True) | ||
| rmsoff80 = FloatField(null=True) | ||
| airtemp = FloatField(null=True) | ||
| xsigma = FloatField(null=True) | ||
| xsigmin = FloatField(null=True) | ||
| xsigmax = FloatField(null=True) | ||
| wsigma = FloatField(null=True) | ||
| wsigmin = FloatField(null=True) | ||
| wsigmax = FloatField(null=True) | ||
| xchi2 = FloatField(null=True) | ||
| xchi2min = FloatField(null=True) | ||
| xchi2max = FloatField(null=True) | ||
| skychi2 = FloatField(null=True) | ||
| schi2min = FloatField(null=True) | ||
| schi2max = FloatField(null=True) | ||
| fbadpix = FloatField(null=True) | ||
| fbadpix1 = FloatField(null=True) | ||
| fbadpix2 = FloatField(null=True) | ||
| n_total = IntegerField(null=True) | ||
| n_galaxy = IntegerField(null=True) | ||
| n_qso = IntegerField(null=True) | ||
| n_star = IntegerField(null=True) | ||
| n_unknown = IntegerField(null=True) | ||
| n_sky = IntegerField(null=True) | ||
| n_std = IntegerField(null=True) | ||
| n_target_qso = IntegerField(null=True) | ||
| n_target_main = IntegerField(null=True) | ||
| n_target_lrg1 = IntegerField(null=True) | ||
| n_target_elg = IntegerField(null=True) | ||
| success_main = FloatField(null=True) | ||
| success_lrg1 = FloatField(null=True) | ||
| success_lrg2 = FloatField(null=True) | ||
| success_elg = FloatField(null=True) | ||
| success_qso = FloatField(null=True) | ||
| status2d = CharField(null=True) | ||
| statuscombine = CharField(null=True) | ||
| status1d = CharField(null=True) | ||
| public = CharField(null=True) | ||
| qualcomments = CharField(null=True) | ||
| moon_frac = FloatField(null=True) | ||
| created = DateTimeField(null=True) | ||
| modified = DateTimeField(constraints=[SQL("DEFAULT now()")], null=True) | ||
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| class Meta: | ||
| table_name = 'boss_field' | ||
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| class BossSpectrum(BossBase): | ||
| id = AutoField() | ||
| boss_version = ForeignKeyField(column_name='boss_version_id', field='id', model=BossVersion) | ||
| field = SmallIntegerField(null=True) | ||
| mjd = IntegerField(null=True) | ||
| mjd_final = FloatField(null=True) | ||
| obs = CharField(null=True) | ||
| run2d = CharField(null=True) | ||
| run1d = CharField(null=True) | ||
| nexp = SmallIntegerField(null=True) | ||
| exptime = FloatField(null=True) | ||
| target_index = IntegerField(null=True) | ||
| spec_file = CharField(null=True) | ||
| programname = CharField(null=True) | ||
| survey = CharField(null=True) | ||
| cadence = CharField(null=True) | ||
| firstcarton = CharField(null=True) | ||
| sdss5_target_flags = BlobField(null=True) | ||
| objtype = CharField(null=True) | ||
| catalogid = BigIntegerField(null=True) | ||
| sdss_id = BigIntegerField(null=True) | ||
| specobjid = BigIntegerField(null=True) | ||
| calibflux = FloatField(null=True) | ||
| calibflux_ivar = FloatField(null=True) | ||
| optical_prov = CharField(null=True) | ||
| mag = ArrayField(FloatField, null=True) # ARRAY | ||
| psfmag = ArrayField(FloatField, null=True) # ARRAY | ||
| fiber2mag = ArrayField(FloatField, null=True) # ARRAY | ||
| catdb_mag = ArrayField(FloatField, null=True) # ARRAY | ||
| gaia_bp_mag = FloatField(null=True) | ||
| gaia_rp_mag = FloatField(null=True) | ||
| gaia_g_mag = FloatField(null=True) | ||
| gaia_id = BigIntegerField(null=True) | ||
| wise_mag = ArrayField(FloatField, null=True) # ARRAY | ||
| twomass_mag = ArrayField(FloatField, null=True) # ARRAY | ||
| guvcat_mag = ArrayField(FloatField, null=True) # ARRAY | ||
| ebv = FloatField(null=True) | ||
| ebv_type = CharField(null=True) | ||
| fiber_ra = DoubleField(null=True) | ||
| fiber_dec = DoubleField(null=True) | ||
| plug_ra = DoubleField(null=True) | ||
| plug_dec = DoubleField(null=True) | ||
| racat = DoubleField(null=True) | ||
| deccat = DoubleField(null=True) | ||
| coord_epoch = FloatField(null=True) | ||
| pmra = FloatField(null=True) | ||
| pmdec = FloatField(null=True) | ||
| parallax = FloatField(null=True) | ||
| fiber_offset = IntegerField(null=True) | ||
| lambda_eff = FloatField(null=True) | ||
| healpix = IntegerField(null=True) | ||
| healpixgrp = SmallIntegerField(null=True) | ||
| healpix_dir = CharField(null=True) | ||
| fieldquality = CharField(null=True) | ||
| exp_disp_med = DoubleField(null=True) | ||
| fieldsn2 = FloatField(null=True) | ||
| spec1_g = FloatField(null=True) | ||
| spec1_r = FloatField(null=True) | ||
| spec1_i = FloatField(null=True) | ||
| spec2_g = FloatField(null=True) | ||
| spec2_r = FloatField(null=True) | ||
| spec2_i = FloatField(null=True) | ||
| sn_median = ArrayField(FloatField, null=True) # ARRAY | ||
| sn_median_all = FloatField(null=True) | ||
| airmass = FloatField(null=True) | ||
| seeing20 = FloatField(null=True) | ||
| seeing50 = FloatField(null=True) | ||
| seeing80 = FloatField(null=True) | ||
| moon_dist = FloatField(null=True) | ||
| moon_phase = FloatField(null=True) | ||
| assigned = BooleanField(null=True) | ||
| on_target = BooleanField(null=True) | ||
| valid = BooleanField(null=True) | ||
| decollided = BooleanField(null=True) | ||
| anyandmask = IntegerField(null=True) | ||
| anyormask = IntegerField(null=True) | ||
| specprimary = SmallIntegerField(null=True) | ||
| specboss = SmallIntegerField(null=True) | ||
| boss_specobj_id = IntegerField(null=True) | ||
| nspecobs = SmallIntegerField(null=True) | ||
| spectroflux = ArrayField(FloatField, null=True) # ARRAY | ||
| spectroflux_ivar = ArrayField(FloatField, null=True) # ARRAY | ||
| spectrosynflux = ArrayField(FloatField, null=True) # ARRAY | ||
| spectrosynflux_ivar = ArrayField(FloatField, null=True) # ARRAY | ||
| spectroskyflux = ArrayField(FloatField, null=True) # ARRAY | ||
| wavemin = FloatField(null=True) | ||
| wavemax = FloatField(null=True) | ||
| wcoverage = FloatField(null=True) | ||
| objclass = CharField(null=True) | ||
| subclass = CharField(null=True) | ||
| z = FloatField(null=True) | ||
| z_err = FloatField(null=True) | ||
| zwarning = IntegerField(null=True) | ||
| rchi2 = FloatField(null=True) | ||
| dof = IntegerField(null=True) | ||
| rchi2diff = FloatField(null=True) | ||
| tfile = CharField(null=True) | ||
| vdisp = FloatField(null=True) | ||
| vdisp_err = FloatField(null=True) | ||
| vdispz = FloatField(null=True) | ||
| vdispz_err = FloatField(null=True) | ||
| vdispchi2 = FloatField(null=True) | ||
| vdispnpix = FloatField(null=True) | ||
| vdispdof = IntegerField(null=True) | ||
| chi68p = FloatField(null=True) | ||
| z_noqso = FloatField(null=True) | ||
| z_err_noqso = FloatField(null=True) | ||
| znum_noqso = IntegerField(null=True) | ||
| zwarning_noqso = IntegerField(null=True) | ||
| class_noqso = CharField(null=True) | ||
| subclass_noqso = CharField(null=True) | ||
| rchi2diff_noqso = FloatField(null=True) | ||
| xcsao_rv = FloatField(null=True) | ||
| xcsao_erv = FloatField(null=True) | ||
| xcsao_rxc = FloatField(null=True) | ||
| xcsao_teff = FloatField(null=True) | ||
| xcsao_eteff = FloatField(null=True) | ||
| xcsao_logg = FloatField(null=True) | ||
| xcsao_elogg = FloatField(null=True) | ||
| xcsao_feh = FloatField(null=True) | ||
| xcsao_efeh = FloatField(null=True) | ||
| created = DateTimeField(null=True) | ||
| modified = DateTimeField(constraints=[SQL("DEFAULT now()")], null=True) | ||
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| class Meta: | ||
| table_name = 'boss_spectrum' | ||
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| class BossSpectrumLine(BossBase): | ||
| id = AutoField() | ||
| boss_version = ForeignKeyField(column_name='boss_version_id', field='id', model=BossVersion) | ||
| field = IntegerField(null=True) | ||
| mjd = IntegerField(null=True) | ||
| target_index = IntegerField(null=True) | ||
| catalogid = BigIntegerField(null=True) | ||
| sdss_id = BigIntegerField(null=True) | ||
| linename = CharField(null=True) | ||
| linewave = DoubleField(null=True) | ||
| linez = FloatField(null=True) | ||
| linez_err = FloatField(null=True) | ||
| linesigma = FloatField(null=True) | ||
| linesigma_err = FloatField(null=True) | ||
| linearea = FloatField(null=True) | ||
| linearea_err = FloatField(null=True) | ||
| lineew = FloatField(null=True) | ||
| lineew_err = FloatField(null=True) | ||
| linecontlevel = FloatField(null=True) | ||
| linecontlevel_err = FloatField(null=True) | ||
| linenpixleft = IntegerField(null=True) | ||
| linenpixright = IntegerField(null=True) | ||
| linedof = FloatField(null=True) | ||
| linechi2 = FloatField(null=True) | ||
| created = DateTimeField(null=True) | ||
| modified = DateTimeField(constraints=[SQL("DEFAULT now()")], null=True) | ||
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| class Meta: | ||
| table_name = 'boss_spectrum_line' |
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