whoops, fix typo

schneebergerlab · Apr 26, 2024 · d60ff03 · d60ff03
1 parent 1996903
commit d60ff03
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/msyd/main.py b/msyd/main.py
@@ -190,7 +190,7 @@ def call(args):
 
         if not args.all:
             logger.info("Pre-filtering VCFs to pansyntenic regions")
-            vcfs = io.filter_vcfs(df, vcfs, ref, no_complex=args.no_complex, add_syn_anns=False, impute_ref=ars.impute)
+            vcfs = io.filter_vcfs(df, vcfs, ref, no_complex=args.no_complex, add_syn_anns=False, impute_ref=args.impute)
 
 
         logger.info(vcfs)