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MERI -> MERA vcf
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lrauschning committed Aug 7, 2024
1 parent 10aae5b commit 9f70442
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2 changes: 1 addition & 1 deletion msyd/pyxfiles/vcf.pyx
Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,7 @@ logger = util.CustomFormatter.getlogger(__name__)

HEADER="""##INFO=<ID=END,Number=1,Type=Integer,Description="End position on reference genome">
##ALT<ID=CORESYN,Description="Coresyntenic region (syntenic between any two samples)">
##ALT<ID=MERISYN,Description="Merasyntenic region (syntenic between any two samples for a strict subset of the samples)">
##ALT<ID=MERASYN,Description="Merasyntenic region (syntenic between any two samples for a strict subset of the samples)">
##INFO=<ID=PID,Number=1,Type=Integer,Description="Numerical part of the ID of the parent PANSYN region. If the PID of a region is 10, it's parent's ID will be CROSSSYN10 or CORESYN10 (and there will be only one of either).">
##FORMAT=<ID=CHR,Number=1,Type=String,Description="Chromosome in this sample">
##FORMAT=<ID=START,Number=1,Type=Integer,Description="Start position in this sample">
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