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refactor: differentiate between files and directories in sources
So I noticed that when using the "Show build target info" feature while using scala-cli it would show individual files under the "Source Directories". I know it's a bit of a nit, but I thought it might be nicer to rename this to "Sources" and then do a better job at indicating which are files, which are directories, and which ones don't exist. If we agree this is better I can fix the related tests as well.
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