autopep8 --in-place --ignore E402 --max-line-length=88 src/sage/**/al…

…l*.py

src/sage/algebras/all.py

@@ -2,7 +2,7 @@
 Algebras
 """
 
-#*****************************************************************************
+# *****************************************************************************
 #       Copyright (C) 2005 William Stein <[email protected]>
 #
 #  Distributed under the terms of the GNU General Public License (GPL)
@@ -15,7 +15,7 @@
 #  The full text of the GPL is available at:
 #
 #                  http://www.gnu.org/licenses/
-#*****************************************************************************
+# *****************************************************************************
 
 from sage.algebras.all__sagemath_modules import *
 from sage.algebras.all__sagemath_combinat import *

src/sage/algebras/lie_algebras/all.py

@@ -2,7 +2,7 @@
 Lie Algebras
 """
 
-#*****************************************************************************
+# *****************************************************************************
 #       Copyright (C) 2013 Travis Scrimshaw <tscrim at ucdavis.edu>
 #
 #  Distributed under the terms of the GNU General Public License (GPL)
@@ -15,10 +15,10 @@
 #  The full text of the GPL is available at:
 #
 #                  http://www.gnu.org/licenses/
-#*****************************************************************************
+# *****************************************************************************
 from sage.misc.lazy_import import lazy_import
 
 lazy_import('sage.algebras.lie_algebras.lie_algebra', 'LieAlgebra')
-#from kac_moody import KacMoodyAlgebra
+# from kac_moody import KacMoodyAlgebra
 lazy_import('sage.algebras.lie_algebras', 'examples', 'lie_algebras')
 del lazy_import

src/sage/algebras/lie_conformal_algebras/all.py

@@ -1,15 +1,17 @@
-#******************************************************************************
+# ******************************************************************************
 #       Copyright (C) 2020 Reimundo Heluani <[email protected]>
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
 # the Free Software Foundation, either version 2 of the License, or
 # (at your option) any later version.
 #                  http://www.gnu.org/licenses/
-#*****************************************************************************
+# *****************************************************************************
 
 
 from sage.misc.lazy_import import lazy_import
-lazy_import('sage.algebras.lie_conformal_algebras.lie_conformal_algebra','LieConformalAlgebra')
-lazy_import('sage.algebras.lie_conformal_algebras', 'examples', 'lie_conformal_algebras')
+lazy_import('sage.algebras.lie_conformal_algebras.lie_conformal_algebra',
+            'LieConformalAlgebra')
+lazy_import('sage.algebras.lie_conformal_algebras',
+            'examples', 'lie_conformal_algebras')
 del lazy_import

src/sage/all.py

@@ -59,96 +59,97 @@
 
 ################ end setup warnings ###############################
 
-from sage.all__sagemath_repl import *  # includes .all__sagemath_objects, .all__sagemath_environment
+# includes .all__sagemath_objects, .all__sagemath_environment
+from sage.all__sagemath_repl import *
 
 ###################################################################
 
 # This import also sets up the interrupt handler
 from cysignals.signals import (AlarmInterrupt, SignalError,
-        sig_on_reset as sig_on_count)
+                               sig_on_reset as sig_on_count)
 
-from time                import sleep
+from time import sleep
 from functools import reduce  # in order to keep reduce in python3
 
 import sage.misc.lazy_import
 
-from sage.misc.all       import *         # takes a while
-from sage.typeset.all    import *
+from sage.misc.all import *         # takes a while
+from sage.typeset.all import *
 
 from sage.misc.sh import sh
 
-from sage.libs.all       import *
+from sage.libs.all import *
 from sage.data_structures.all import *
 
-from sage.structure.all  import *
-from sage.rings.all      import *
-from sage.arith.all      import *
-from sage.matrix.all     import *
-
-from sage.symbolic.all   import *
-from sage.modules.all    import *
-from sage.monoids.all    import *
-from sage.algebras.all   import *
-from sage.modular.all    import *
-from sage.sat.all        import *
-from sage.schemes.all    import *
-from sage.graphs.all     import *
-from sage.groups.all     import *
-from sage.arith.power    import generic_power as power
-from sage.databases.all  import *
+from sage.structure.all import *
+from sage.rings.all import *
+from sage.arith.all import *
+from sage.matrix.all import *
+
+from sage.symbolic.all import *
+from sage.modules.all import *
+from sage.monoids.all import *
+from sage.algebras.all import *
+from sage.modular.all import *
+from sage.sat.all import *
+from sage.schemes.all import *
+from sage.graphs.all import *
+from sage.groups.all import *
+from sage.arith.power import generic_power as power
+from sage.databases.all import *
 from sage.categories.all import *
-from sage.sets.all       import *
+from sage.sets.all import *
 from sage.probability.all import *
 from sage.interfaces.all import *
 
-from sage.functions.all  import *
-from sage.calculus.all   import *
+from sage.functions.all import *
+from sage.calculus.all import *
 
 lazy_import('sage.tests', 'all', as_='tests', deprecation=27337)
-from sage.cpython.all    import *
+from sage.cpython.all import *
 
-from sage.crypto.all     import *
+from sage.crypto.all import *
 import sage.crypto.mq as mq
 
-from sage.plot.all       import *
-from sage.plot.plot3d.all     import *
+from sage.plot.all import *
+from sage.plot.plot3d.all import *
 
-from sage.coding.all     import *
-from sage.combinat.all   import *
+from sage.coding.all import *
+from sage.combinat.all import *
 
 from sage.lfunctions.all import *
 
-from sage.geometry.all   import *
-from sage.geometry.triangulation.all   import *
-from sage.geometry.riemannian_manifolds.all   import *
+from sage.geometry.all import *
+from sage.geometry.triangulation.all import *
+from sage.geometry.riemannian_manifolds.all import *
 
-from sage.dynamics.all   import *
+from sage.dynamics.all import *
 
-from sage.homology.all   import *
+from sage.homology.all import *
 
-from sage.topology.all   import *
+from sage.topology.all import *
 
 from sage.quadratic_forms.all import *
 
-from sage.games.all      import *
+from sage.games.all import *
 
-from sage.logic.all      import *
+from sage.logic.all import *
 
-from sage.numerical.all  import *
+from sage.numerical.all import *
 
-from sage.stats.all      import *
+from sage.stats.all import *
 import sage.stats.all as stats
 
-from sage.parallel.all   import *
+from sage.parallel.all import *
 
-from sage.ext.fast_callable  import fast_callable
-from sage.ext.fast_eval      import fast_float
+from sage.ext.fast_callable import fast_callable
+from sage.ext.fast_eval import fast_float
 
 from sage.sandpiles.all import *
 
-from sage.tensor.all     import *
+from sage.tensor.all import *
 
-from sage.matroids.all   import *
+from sage.matroids.all import *
 
 from sage.game_theory.all import *
 
@@ -168,7 +169,7 @@
 _init_qqbar()
 
 ###########################################################
-#### WARNING:
+# WARNING:
 # DO *not* import numpy / matplotlib / networkx here!!
 # Each takes a surprisingly long time to initialize,
 # and that initialization should be done more on-the-fly
@@ -190,31 +191,37 @@
 copying = license
 copyright = license
 
+
 def quit_sage(verbose=True):
     """
     Does nothing. Code that needs cleanup should register its own
     handler using the atexit module.
     """
     from sage.misc.superseded import deprecation
-    deprecation(8784, 'quit_sage is deprecated and now does nothing; please simply delete it')
+    deprecation(
+        8784, 'quit_sage is deprecated and now does nothing; please simply delete it')
 
 
 from sage.misc.persist import register_unpickle_override
 register_unpickle_override('sage.categories.category', 'Sets', Sets)
-register_unpickle_override('sage.categories.category_types', 'HeckeModules', HeckeModules)
+register_unpickle_override('sage.categories.category_types',
+                           'HeckeModules', HeckeModules)
 register_unpickle_override('sage.categories.category_types', 'Objects', Objects)
 register_unpickle_override('sage.categories.category_types', 'Rings', Rings)
 register_unpickle_override('sage.categories.category_types', 'Fields', Fields)
-register_unpickle_override('sage.categories.category_types', 'VectorSpaces', VectorSpaces)
-register_unpickle_override('sage.categories.category_types', 'Schemes_over_base', sage.categories.schemes.Schemes_over_base)
-register_unpickle_override('sage.categories.category_types', 'ModularAbelianVarieties', ModularAbelianVarieties)
+register_unpickle_override('sage.categories.category_types',
+                           'VectorSpaces', VectorSpaces)
+register_unpickle_override('sage.categories.category_types',
+                           'Schemes_over_base', sage.categories.schemes.Schemes_over_base)
+register_unpickle_override('sage.categories.category_types',
+                           'ModularAbelianVarieties', ModularAbelianVarieties)
 register_unpickle_override('sage.libs.pari.gen_py', 'pari', pari)
 
 # Cache the contents of star imports.
 sage.misc.lazy_import.save_cache_file()
 
 
-### Debugging for Singular, see trac #10903
+# Debugging for Singular, see trac #10903
 # from sage.libs.singular.ring import poison_currRing
 # sys.settrace(poison_currRing)
 
@@ -241,7 +248,7 @@ def quit_sage(verbose=True):
 sage.misc.lazy_import.finish_startup()
 
 
-### Python broke large ints; see trac #34506
+# Python broke large ints; see trac #34506
 
 if hasattr(sys, "set_int_max_str_digits"):
     sys.set_int_max_str_digits(0)

src/sage/all__sagemath_objects.py

@@ -9,16 +9,16 @@
 
 # This import also sets up the interrupt handler
 from cysignals.signals import (AlarmInterrupt, SignalError,
-        sig_on_reset as sig_on_count)
+                               sig_on_reset as sig_on_count)
 
-from time                import sleep
+from time import sleep
 
-from sage.misc.all__sagemath_objects       import *
-from sage.structure.all  import *
-from sage.arith.power    import generic_power as power
+from sage.misc.all__sagemath_objects import *
+from sage.structure.all import *
+from sage.arith.power import generic_power as power
 from sage.categories.all__sagemath_objects import *
 
-from sage.cpython.all    import *
+from sage.cpython.all import *
 
 from cysignals.alarm import alarm, cancel_alarm
 

src/sage/all__sagemath_repl.py

@@ -2,7 +2,8 @@
 import sys
 import warnings
 
-__with_pydebug = hasattr(sys, 'gettotalrefcount')   # This is a Python debug build (--with-pydebug)
+# This is a Python debug build (--with-pydebug)
+__with_pydebug = hasattr(sys, 'gettotalrefcount')
 if __with_pydebug:
     # a debug build does not install the default warning filters. Sadly, this breaks doctests so we
     # have to re-add them:
@@ -16,38 +17,38 @@
 
 # Ignore all deprecations from IPython etc.
 warnings.filterwarnings('ignore', category=DeprecationWarning,
-    module='(IPython|ipykernel|jupyter_client|jupyter_core|nbformat|notebook|ipywidgets|storemagic|jedi)')
+                        module='(IPython|ipykernel|jupyter_client|jupyter_core|nbformat|notebook|ipywidgets|storemagic|jedi)')
 
 # scipy 1.18 introduced reprecation warnings on a number of things they are moving to
 # numpy, e.g. DeprecationWarning: scipy.array is deprecated
 #             and will be removed in SciPy 2.0.0, use numpy.array instead
 # This affects networkx 2.2 up and including 2.4 (cf. :trac:29766)
 warnings.filterwarnings('ignore', category=DeprecationWarning,
-    module='(scipy|networkx)')
+                        module='(scipy|networkx)')
 
 # However, be sure to keep OUR deprecation warnings
 warnings.filterwarnings('default', category=DeprecationWarning,
-    message=r'[\s\S]*See https?://trac\.sagemath\.org/[0-9]* for details.')
+                        message=r'[\s\S]*See https?://trac\.sagemath\.org/[0-9]* for details.')
 
 # Ignore Python 3.9 deprecation warnings
 warnings.filterwarnings('ignore', category=DeprecationWarning,
-    module='ast')
+                        module='ast')
 
 # Ignore packaging 20.5 deprecation warnings
 warnings.filterwarnings('ignore', category=DeprecationWarning,
-    module='(.*[.]_vendor[.])?packaging')
+                        module='(.*[.]_vendor[.])?packaging')
 
 # Ignore a few warnings triggered by pythran 0.12.1
 warnings.filterwarnings('ignore', category=DeprecationWarning,
-    message='\n\n  `numpy.distutils` is deprecated since NumPy 1.23.0',
-    module='pythran.dist')
+                        message='\n\n  `numpy.distutils` is deprecated since NumPy 1.23.0',
+                        module='pythran.dist')
 warnings.filterwarnings('ignore', category=DeprecationWarning,
-    message='pkg_resources is deprecated as an API|'
-            'Deprecated call to `pkg_resources.declare_namespace(.*)`',
-    module='pkg_resources|setuptools.sandbox')
+                        message='pkg_resources is deprecated as an API|'
+                        'Deprecated call to `pkg_resources.declare_namespace(.*)`',
+                        module='pkg_resources|setuptools.sandbox')
 warnings.filterwarnings('ignore', category=DeprecationWarning,
-    message='msvccompiler is deprecated and slated to be removed',
-    module='distutils.msvccompiler')
+                        message='msvccompiler is deprecated and slated to be removed',
+                        module='distutils.msvccompiler')
 
 warnings.filterwarnings('ignore', category=DeprecationWarning,
                         message='The distutils(.sysconfig module| package) is deprecated',
@@ -100,8 +101,8 @@
 from sage.all__sagemath_objects import *
 from sage.all__sagemath_environment import *
 
-from sage.doctest.all    import *
-from sage.repl.all       import *
+from sage.doctest.all import *
+from sage.repl.all import *
 from sage.misc.all__sagemath_repl import *
 
 # For doctesting. These are overwritten later

src/sage/all_cmdline.py

@@ -19,7 +19,7 @@
 
 from sage.misc.lazy_import import lazy_import
 
-for pkg in ['axiom', 'fricas', 'gap' , 'gap3', 'giac', 'gp',
+for pkg in ['axiom', 'fricas', 'gap', 'gap3', 'giac', 'gp',
             'gnuplot', 'kash', 'magma', 'macaulay2', 'maple',
             'mathematica', 'mathics', 'matlab',
             'mupad', 'mwrank', 'octave', 'qepcad', 'singular',