resources.network: wrapper around original module adds license info…

…rmation to input definitions from controller - saezlab/OmnipathR#87

pypath/resources/network.py

@@ -0,0 +1,39 @@
+#!/usr/bin/env python
+# -*- coding: utf-8 -*-
+
+#
+# This file is part of the `pypath` python module
+#
+# Copyright 2014-2024
+# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
+#
+# Authors: see the file `README.rst`
+# Contact: Dénes Türei ([email protected])
+#
+# Distributed under the GPLv3 License.
+# See accompanying file LICENSE.txt or copy at
+# https://www.gnu.org/licenses/gpl-3.0.html
+#
+# Website: https://pypath.omnipathdb.org/
+#
+
+import pypath.resources._network as _netres
+import pypath.resources as _resources
+import pypath.internals.resource as _resfmt
+from pypath.resources._network import choose_dataset, dorothea_expand_levels
+
+_co = _resources.get_controller()
+
+for _dataset_label in dir(_netres):
+
+ _dataset = getattr(_netres, _dataset_label)
+
+ if not isinstance(_dataset, _resfmt.NetworkDataset):
+
+ continue
+
+ for _label, _resource in _dataset.items():
+
+ _resource.resource_attrs['license'] = _co.license(_resource.name)
+
+ globals()[_dataset_label] = _dataset