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delivery of new vignettes #115

delivery of new vignettes

delivery of new vignettes #115

Triggered via push April 16, 2024 16:49
Status Success
Total duration 3h 30m 9s
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check-bioc.yml

on: push
Matrix: build-check
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9 errors and 39 warnings
macOS-latest (4.3)
there is no package called ‘xlsx’
macOS-latest (4.3)
unable to start data viewer
macOS-latest (4.3)
conditions written in contrasts should be in the condition-indicating column! This is not the case, which can lead to errors downstream.
macOS-latest (4.3)
could not find function "get_abundance_expression_info"
macOS-latest (4.3)
could not find function "get_abundance_expression_info"
windows-latest (4.3)
there is no package called 'xlsx'
windows-latest (4.3)
conditions written in contrasts should be in the condition-indicating column! This is not the case, which can lead to errors downstream.
windows-latest (4.3)
could not find function "get_abundance_expression_info"
windows-latest (4.3)
could not find function "get_abundance_expression_info"
ubuntu-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
'::' or ':::' import not declared from: ‘scuttle’
macOS-latest (4.3)
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
macOS-latest (4.3)
Undocumented arguments in documentation object 'process_abundance_expression_info'
macOS-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':
macOS-latest (4.3)
Directory 'inst/doc' does not exist.
macOS-latest (4.3)
unable to open display
macOS-latest (4.3)
'::' or ':::' import not declared from: ‘scuttle’
macOS-latest (4.3)
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
macOS-latest (4.3)
Undocumented arguments in documentation object 'process_abundance_expression_info'
macOS-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':
windows-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (4.3)
'::' or ':::' import not declared from: 'scuttle'
windows-latest (4.3)
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
windows-latest (4.3)
Undocumented arguments in documentation object 'process_abundance_expression_info'
windows-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':
windows-latest (4.3)
Directory 'inst/doc' does not exist.
windows-latest (4.3)
'::' or ':::' import not declared from: 'scuttle'
windows-latest (4.3)
Codoc mismatches from documentation object 'get_frac_exprs_sampleAgnostic':
windows-latest (4.3)
Undocumented arguments in documentation object 'process_abundance_expression_info'
windows-latest (4.3)
Files in the 'vignettes' directory but no files in 'inst/doc':
windows-latest (4.3)
Directory 'inst/doc' does not exist.