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export with FOV specified by landmarks fails in 2d #108

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bogovicj opened this issue Nov 25, 2020 · 1 comment
Open

export with FOV specified by landmarks fails in 2d #108

bogovicj opened this issue Nov 25, 2020 · 1 comment

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@bogovicj
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Exception in thread "Thread-16" java.lang.ArrayIndexOutOfBoundsException: 3
	at net.imglib2.view.ViewTransforms.permute(ViewTransforms.java:119)
	at net.imglib2.view.Views.permute(Views.java:445)
	at bigwarp.BigWarpARGBExporter.copyToImageStack(BigWarpARGBExporter.java:174)
	at bigwarp.BigWarpARGBExporter.export(BigWarpARGBExporter.java:116)
	at bigwarp.BigWarpExporter$ExportThread.run(BigWarpExporter.java:720)
@bogovicj
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Possibly related:

Exception in thread "Thread-12" java.lang.ArrayIndexOutOfBoundsException: 2
	at net.imglib2.realtransform.Wrapped2DTransformAs3D.applyInverse(Wrapped2DTransformAs3D.java:74)
	at bigwarp.landmarks.LandmarkTableModel.computeWarpedPoint(LandmarkTableModel.java:820)
	at bigwarp.landmarks.LandmarkTableModel.updateAllWarpedPoints(LandmarkTableModel.java:790)
	at bigwarp.BigWarp$SolveThread.run(BigWarp.java:3476)

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@bogovicj