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2 changes: 1 addition & 1 deletion .nojekyll
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14 changes: 7 additions & 7 deletions material/1_mon/envs/envs_handout.html
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Expand Up @@ -759,7 +759,7 @@ <h3 class="anchored" data-anchor-id="adding-dependencies">Adding dependencies</h
<dl class="code-annotation-container-hidden code-annotation-container-grid">
<dt data-target-cell="annotated-cell-5" data-target-annotation="1">1</dt>
<dd>
<span data-code-lines="3" data-code-annotation="1" data-code-cell="annotated-cell-5">let’s directly add a compat entry for ProgressMeter</span>
<span data-code-cell="annotated-cell-5" data-code-lines="3" data-code-annotation="1">let’s directly add a compat entry for ProgressMeter</span>
</dd>
</dl>
</section>
Expand Down Expand Up @@ -792,23 +792,23 @@ <h3 class="anchored" data-anchor-id="compat-entries">Compat entries</h3>
<dl class="code-annotation-container-hidden code-annotation-container-grid">
<dt data-target-cell="annotated-cell-6" data-target-annotation="1">1</dt>
<dd>
<span data-code-lines="2" data-code-annotation="1" data-code-cell="annotated-cell-6">[1.0.0-2)</span>
<span data-code-cell="annotated-cell-6" data-code-lines="2" data-code-annotation="1">[1.0.0-2)</span>
</dd>
<dt data-target-cell="annotated-cell-6" data-target-annotation="2">2</dt>
<dd>
<span data-code-lines="3" data-code-annotation="2" data-code-cell="annotated-cell-6">[1.5.0-2)</span>
<span data-code-cell="annotated-cell-6" data-code-lines="3" data-code-annotation="2">[1.5.0-2)</span>
</dd>
<dt data-target-cell="annotated-cell-6" data-target-annotation="3">3</dt>
<dd>
<span data-code-lines="4" data-code-annotation="3" data-code-cell="annotated-cell-6">[1.5.3-2)</span>
<span data-code-cell="annotated-cell-6" data-code-lines="4" data-code-annotation="3">[1.5.3-2)</span>
</dd>
<dt data-target-cell="annotated-cell-6" data-target-annotation="4">4</dt>
<dd>
<span data-code-lines="5" data-code-annotation="4" data-code-cell="annotated-cell-6">[1.5.6]</span>
<span data-code-cell="annotated-cell-6" data-code-lines="5" data-code-annotation="4">[1.5.6]</span>
</dd>
<dt data-target-cell="annotated-cell-6" data-target-annotation="5">5</dt>
<dd>
<span data-code-lines="7" data-code-annotation="5" data-code-cell="annotated-cell-6">[0.2.3 - 0.3)</span>
<span data-code-cell="annotated-cell-6" data-code-lines="7" data-code-annotation="5">[0.2.3 - 0.3)</span>
</dd>
</dl>
<p>As you can see, develop version (<code>version &lt; 1</code>) are treated a bit special in Julia, and different to <code>semver</code>. <a href="https://pkgdocs.julialang.org/v1/compatibility/#compat-pre-1.0">Read more here</a></p>
Expand Down Expand Up @@ -840,7 +840,7 @@ <h3 class="anchored" data-anchor-id="internals-of-a-package">Internals of a pack
<dl class="code-annotation-container-hidden code-annotation-container-grid">
<dt data-target-cell="annotated-cell-7" data-target-annotation="1">1</dt>
<dd>
<span data-code-lines="2" data-code-annotation="1" data-code-cell="annotated-cell-7">We use GLMakie as a simple example as you need it on Wednesday again anyway - it does take a while to install though!</span>
<span data-code-cell="annotated-cell-7" data-code-lines="2" data-code-annotation="1">We use GLMakie as a simple example as you need it on Wednesday again anyway - it does take a while to install though!</span>
</dd>
</dl>
<p>Now we are ready to use the package from a different environment</p>
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4 changes: 2 additions & 2 deletions material/3_wed/linalg/slides.html

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2 changes: 1 addition & 1 deletion material/3_wed/vis/handout.html
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Expand Up @@ -580,7 +580,7 @@ <h2 class="anchored" data-anchor-id="bonus-makie-interactivity">Bonus: Makie Int
<dl class="code-annotation-container-hidden code-annotation-container-grid">
<dt data-target-cell="annotated-cell-5" data-target-annotation="1">1</dt>
<dd>
<span data-code-lines="5" data-code-cell="annotated-cell-5" data-code-annotation="1"><code>@lift</code> does the heavy lifting (hrhr) here. It adds a listener to <code>obs_ix</code>, whenever that value is changed, the value of the output of <code>@lift</code> is changed as well ## Task 2: Interactivity <a href="../../../material/3_wed/vis/tasks.html#2">Click here for the next task</a></span>
<span data-code-annotation="1" data-code-lines="5" data-code-cell="annotated-cell-5"><code>@lift</code> does the heavy lifting (hrhr) here. It adds a listener to <code>obs_ix</code>, whenever that value is changed, the value of the output of <code>@lift</code> is changed as well ## Task 2: Interactivity <a href="../../../material/3_wed/vis/tasks.html#2">Click here for the next task</a></span>
</dd>
</dl>
</section>
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56 changes: 54 additions & 2 deletions projectwork.html
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<meta property="og:title" content="Research Software Engineering Summer School - Project Work">
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<nav id="TOC" role="doc-toc" class="toc-active" data-toc-expanded="3">
<h2 id="toc-title">On this page</h2>

<ul>
<li><a href="#project-analyzing-spatial-data" id="toc-project-analyzing-spatial-data" class="nav-link active" data-scroll-target="#project-analyzing-spatial-data">Project: Analyzing Spatial Data</a></li>
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Expand All @@ -394,9 +436,19 @@ <h1 class="title">Project Work</h1>
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<p>A considerable of time will be dedicated to project work allowing you to apply the skills you have learnt during the summer school.</p>
<p>We encourage you to bring your own problem (e.g.&nbsp;something related to your own research) and try to build a small software package for that problem. Moreover, we will provide alternative problems to be solved.</p>
<p>We encourage you to bring your own problem (e.g.&nbsp;something related to your own research) and try to build a small software package for that problem.</p>
<p>Moreover, we will provide alternative problems to be solved:</p>
<section id="project-analyzing-spatial-data" class="level2">
<h2 class="anchored" data-anchor-id="project-analyzing-spatial-data">Project: Analyzing Spatial Data</h2>
<p>In this project, we propose to write a package that allows for the statistical analysis of spatially indexed data.</p>
<p>Before starting, you might look at an data example. To this end, download <a href="TemperatureData.jld2">TemperatureData.jld2</a> and read this data via</p>
<div class="sourceCode" id="cb1"><pre class="sourceCode julia code-with-copy"><code class="sourceCode julia"><span id="cb1-1"><a href="#cb1-1" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb1-2"><a href="#cb1-2" aria-hidden="true" tabindex="-1"></a><span class="im">using</span> <span class="bu">JLD2 </span><span class="pp">@load</span> <span class="st">"TemperatureData.jld2"</span> <span class="op">\</span><span class="co">## potentially correct your path</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
<p>This will give you data frames with information on weather stations in the Netherlands, summer temperature means (in <span class="math inline">\(0.1^\circ\mathrm{C}\)</span>) and summer temperature maxima (in <span class="math inline">\(0.1^\circ\mathrm{C}\)</span>). It is reasonable to assume that the temperature data are temporally independent. Furthermore, assuming a normal distribution at each station is quite common for this type of data.</p>
<p>A reasonable package could for instance contain functions to estimate means and standard deviations station-by-station, fit linear models for <span class="math inline">\(\mu\)</span> or <span class="math inline">\(\log(\sigma)\)</span> (with, e.g., geographic coordinates as covariates), or, provided that <span class="math inline">\(\sigma\)</span> is constant over space, a linear model for the data themselves (with repetitions.) $</p>


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