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* rgeos replaced by sf and raster to terra * terra removed aggregation done with sf * github actions : add coverage * check reverse dep : add revdep
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,12 +1,14 @@ | ||
| ^.*\.Rproj$ | ||
| ^\.Rproj\.user$ | ||
| ^appveyor\.yml$ | ||
| ^\.travis\.yml$ | ||
| ^codecov\.yml$ | ||
| inst/examples | ||
| ^_pkgdown\.yml$ | ||
| ^docs$ | ||
| ^pkgdown$ | ||
| ^cran-comments\.md$ | ||
| ^CRAN-RELEASE$ | ||
| ^\.github$ | ||
| ^.*\.Rproj$ | ||
| ^\.Rproj\.user$ | ||
| ^appveyor\.yml$ | ||
| ^\.travis\.yml$ | ||
| ^codecov\.yml$ | ||
| inst/examples | ||
| ^_pkgdown\.yml$ | ||
| ^docs$ | ||
| ^pkgdown$ | ||
| ^cran-comments\.md$ | ||
| ^CRAN-RELEASE$ | ||
| ^\.github$ | ||
| ^revdep$ | ||
| ^README\.Rmd$ |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,50 @@ | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: [main, master] | ||
|
|
||
| name: test-coverage | ||
|
|
||
| jobs: | ||
| test-coverage: | ||
| runs-on: ubuntu-latest | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
|
|
||
| steps: | ||
| - uses: actions/checkout@v3 | ||
|
|
||
| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| use-public-rspm: true | ||
|
|
||
| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::covr | ||
| needs: coverage | ||
|
|
||
| - name: Test coverage | ||
| run: | | ||
| covr::codecov( | ||
| quiet = FALSE, | ||
| clean = FALSE, | ||
| install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package") | ||
| ) | ||
| shell: Rscript {0} | ||
|
|
||
| - name: Show testthat output | ||
| if: always() | ||
| run: | | ||
| ## -------------------------------------------------------------------- | ||
| find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true | ||
| shell: bash | ||
|
|
||
| - name: Upload test results | ||
| if: failure() | ||
| uses: actions/upload-artifact@v3 | ||
| with: | ||
| name: coverage-test-failures | ||
| path: ${{ runner.temp }}/package |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,6 +1,10 @@ | ||
| .Rproj.user | ||
| .Rhistory | ||
| .RData | ||
| .Ruserdata | ||
| inst/examples | ||
| inst/doc | ||
| .Rproj.user | ||
| .Rhistory | ||
| .RData | ||
| .Ruserdata | ||
| .idea | ||
| inst/examples | ||
| inst/doc | ||
| .Rdata | ||
| .httr-oauth | ||
| .DS_Store |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,75 +1,74 @@ | ||
| # Generated by roxygen2: do not edit by hand | ||
|
|
||
| S3method(plot,antaresData) | ||
| S3method(plot,list) | ||
| S3method(plot,mapLayout) | ||
| S3method(plot,simOptions) | ||
| export(addShadows) | ||
| export(colorScaleOptions) | ||
| export(defaultTilesURL) | ||
| export(exchangesStack) | ||
| export(exchangesStackAliases) | ||
| export(getInteractivity) | ||
| export(leafletDragPointsOutput) | ||
| export(limitSizeGraph) | ||
| export(mapLayout) | ||
| export(modRpart) | ||
| export(modXY) | ||
| export(plotMap) | ||
| export(plotMapLayout) | ||
| export(plotMapOptions) | ||
| export(plotThermalGroupCapacities) | ||
| export(plotXY) | ||
| export(prodStack) | ||
| export(prodStackAliases) | ||
| export(prodStackExchangesLegend) | ||
| export(prodStackLegend) | ||
| export(renderLeafletDragPoints) | ||
| export(runAppAntaresViz) | ||
| export(savePlotAsPng) | ||
| export(setExchangesStackAlias) | ||
| export(setInteractivity) | ||
| export(setProdStackAlias) | ||
| export(stackMap) | ||
| export(tsLegend) | ||
| export(tsPlot) | ||
| import(antaresProcessing) | ||
| import(antaresRead) | ||
| import(assertthat) | ||
| import(data.table) | ||
| import(dygraphs) | ||
| import(htmltools) | ||
| import(leaflet) | ||
| import(leaflet.minicharts) | ||
| import(manipulateWidget) | ||
| import(rAmCharts) | ||
| import(shiny) | ||
| import(sp) | ||
| import(spMaps) | ||
| importFrom(geojsonio,geojson_json) | ||
| importFrom(grDevices,col2rgb) | ||
| importFrom(grDevices,colorRampPalette) | ||
| importFrom(grDevices,colors) | ||
| importFrom(grDevices,gray) | ||
| importFrom(grDevices,rainbow) | ||
| importFrom(grDevices,rgb) | ||
| importFrom(graphics,par) | ||
| importFrom(graphics,plot.default) | ||
| importFrom(methods,is) | ||
| importFrom(plotly,add_bars) | ||
| importFrom(plotly,add_heatmap) | ||
| importFrom(plotly,add_text) | ||
| importFrom(plotly,add_trace) | ||
| importFrom(plotly,config) | ||
| importFrom(plotly,layout) | ||
| importFrom(plotly,plot_ly) | ||
| importFrom(raster,aggregate) | ||
| importFrom(rgeos,gDistance) | ||
| importFrom(shiny,runApp) | ||
| importFrom(stats,as.formula) | ||
| importFrom(stats,density) | ||
| importFrom(stats,lm) | ||
| importFrom(stats,predict) | ||
| importFrom(stats,quantile) | ||
| importFrom(utils,capture.output) | ||
| importFrom(utils,object.size) | ||
| # Generated by roxygen2: do not edit by hand | ||
|
|
||
| S3method(plot,antaresData) | ||
| S3method(plot,list) | ||
| S3method(plot,mapLayout) | ||
| S3method(plot,simOptions) | ||
| export(addShadows) | ||
| export(colorScaleOptions) | ||
| export(defaultTilesURL) | ||
| export(exchangesStack) | ||
| export(exchangesStackAliases) | ||
| export(getInteractivity) | ||
| export(leafletDragPointsOutput) | ||
| export(limitSizeGraph) | ||
| export(mapLayout) | ||
| export(modRpart) | ||
| export(modXY) | ||
| export(plotMap) | ||
| export(plotMapLayout) | ||
| export(plotMapOptions) | ||
| export(plotThermalGroupCapacities) | ||
| export(plotXY) | ||
| export(prodStack) | ||
| export(prodStackAliases) | ||
| export(prodStackExchangesLegend) | ||
| export(prodStackLegend) | ||
| export(renderLeafletDragPoints) | ||
| export(runAppAntaresViz) | ||
| export(savePlotAsPng) | ||
| export(setExchangesStackAlias) | ||
| export(setInteractivity) | ||
| export(setProdStackAlias) | ||
| export(stackMap) | ||
| export(tsLegend) | ||
| export(tsPlot) | ||
| import(antaresProcessing) | ||
| import(antaresRead) | ||
| import(assertthat) | ||
| import(data.table) | ||
| import(dygraphs) | ||
| import(htmltools) | ||
| import(leaflet) | ||
| import(leaflet.minicharts) | ||
| import(manipulateWidget) | ||
| import(rAmCharts) | ||
| import(sf) | ||
| import(shiny) | ||
| import(sp) | ||
| import(spMaps) | ||
| importFrom(geojsonio,geojson_json) | ||
| importFrom(grDevices,col2rgb) | ||
| importFrom(grDevices,colorRampPalette) | ||
| importFrom(grDevices,colors) | ||
| importFrom(grDevices,gray) | ||
| importFrom(grDevices,rainbow) | ||
| importFrom(grDevices,rgb) | ||
| importFrom(graphics,par) | ||
| importFrom(graphics,plot.default) | ||
| importFrom(methods,is) | ||
| importFrom(plotly,add_bars) | ||
| importFrom(plotly,add_heatmap) | ||
| importFrom(plotly,add_text) | ||
| importFrom(plotly,add_trace) | ||
| importFrom(plotly,config) | ||
| importFrom(plotly,layout) | ||
| importFrom(plotly,plot_ly) | ||
| importFrom(shiny,runApp) | ||
| importFrom(stats,as.formula) | ||
| importFrom(stats,density) | ||
| importFrom(stats,lm) | ||
| importFrom(stats,predict) | ||
| importFrom(stats,quantile) | ||
| importFrom(utils,capture.output) | ||
| importFrom(utils,object.size) |
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