Move code-quality into its own job. #111
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Python package | |
on: [push, pull_request] | |
jobs: | |
code-quality: | |
runs-on: ubuntu-22.04 | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python. | |
uses: actions/setup-python@v4 | |
with: | |
python-version: "3.10" | |
- name: Lint with flake8 | |
run: | | |
pip install flake8 | |
flake8 rpy2_r6 --count --max-complexity=10 --max-line-length=127 --statistics | |
build: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
max-parallel: 4 | |
matrix: | |
python-version: [3.7, 3.8, 3.9, "3.10"] | |
r-version: [4.0, 'release'] | |
os: [ubuntu-20.04, ubuntu-latest, macOS-latest] | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Set up R ${{ matrix.r-version }} | |
uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.r-version }} | |
- name: Install R dependencies | |
run: | | |
install.packages("R6") | |
shell: Rscript {0} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install rpy2 | |
- name: Install package | |
run: | | |
python setup.py install | |
- name: Test with pytest | |
run: | | |
export LD_LIBRARY_PATH=$(python -m rpy2.situation LD_LIBRARY_PATH):${LD_LIBRARY_PATH} | |
pip install pytest codecov pytest-cov | |
pytest --cov rpy2_r6.R6 rpy2_r6/tests* |