Homebrew-science

These formulae provide software tailored to scientific endeavors. Need to store large amounts of data in a sparse matrix, solve a huge optimization problem or process the images from your space telescope? Maybe we can help!

How do I install these formulae?

Just brew tap homebrew/science and then brew install <formula>.

If the formula conflicts with one from mxcl/master or another tap, you can brew install homebrew/science/<formula>.

You can also install via URL:

brew install https://raw.github.com/Homebrew/homebrew-science/master/<formula>.rb

Docs

brew help, man brew, or the Homebrew wiki.

Contributing

Please see the contributing wiki page.

Name		Name	Last commit message	Last commit date
Latest commit History 1,273 Commits
README.md		README.md
abyss-explorer.rb		abyss-explorer.rb
abyss.rb		abyss.rb
adol-c.rb		adol-c.rb
alembic.rb		alembic.rb
allpaths-lg.rb		allpaths-lg.rb
amos.rb		amos.rb
analysis.rb		analysis.rb
ann.rb		ann.rb
armadillo.rb		armadillo.rb
arow++.rb		arow++.rb
arpack.rb		arpack.rb
asl.rb		asl.rb
augustus.rb		augustus.rb
bact.rb		bact.rb
bali-phy.rb		bali-phy.rb
bam-readcount.rb		bam-readcount.rb
bamtools.rb		bamtools.rb
bamutil.rb		bamutil.rb
beagle.rb		beagle.rb
beast.rb		beast.rb
bedops.rb		bedops.rb
bedtools.rb		bedtools.rb
beetl.rb		beetl.rb
bioawk.rb		bioawk.rb
biocgal.rb		biocgal.rb
bitseq.rb		bitseq.rb
blasr.rb		blasr.rb
blast.rb		blast.rb
blat.rb		blat.rb
bowtie.rb		bowtie.rb
bowtie2.rb		bowtie2.rb
bpel2owfn.rb		bpel2owfn.rb
bwa.rb		bwa.rb
bwtdisk.rb		bwtdisk.rb
cap3.rb		cap3.rb
cd-hit.rb		cd-hit.rb
cddlib.rb		cddlib.rb
cdo.rb		cdo.rb
cdsclient.rb		cdsclient.rb
cegma.rb		cegma.rb
celera-assembler.rb		celera-assembler.rb
ceres-solver.rb		ceres-solver.rb
cgap.rb		cgap.rb
cgns.rb		cgns.rb
circos.rb		circos.rb
clustal-omega.rb		clustal-omega.rb
clustal-w.rb		clustal-w.rb
cminpack.rb		cminpack.rb
coinmp.rb		coinmp.rb
coinutils.rb		coinutils.rb
colpack.rb		colpack.rb
cppad.rb		cppad.rb
crfsuite.rb		crfsuite.rb
cufflinks.rb		cufflinks.rb
dadadodo.rb		dadadodo.rb
data-science-toolbox.rb		data-science-toolbox.rb
delly.rb		delly.rb
dsk.rb		dsk.rb
dssp.rb		dssp.rb
edena.rb		edena.rb
edirect.rb		edirect.rb
elph.rb		elph.rb
emboss.rb		emboss.rb
enblend-enfuse.rb		enblend-enfuse.rb
ensembl-tools.rb		ensembl-tools.rb
exonerate.rb		exonerate.rb
fann.rb		fann.rb
fast-statistical-alignment.rb		fast-statistical-alignment.rb
fasta.rb		fasta.rb
fastqc.rb		fastqc.rb
fasttree.rb		fasttree.rb
fastx_toolkit.rb		fastx_toolkit.rb
fermi.rb		fermi.rb
field3d.rb		field3d.rb
flann.rb		flann.rb
fwdpp.rb		fwdpp.rb
galib.rb		galib.rb
geant.rb		geant.rb
geneid.rb		geneid.rb
genet.rb		genet.rb
genewise.rb		genewise.rb
gfan.rb		gfan.rb
glimmer3.rb		glimmer3.rb
glpk.rb		glpk.rb
gmap-gsnap.rb		gmap-gsnap.rb
gmt.rb		gmt.rb
gmt4.rb		gmt4.rb
graph-tool.rb		graph-tool.rb
gtsam.rb		gtsam.rb
h5utils.rb		h5utils.rb
hdf5.rb		hdf5.rb
hmmer.rb		hmmer.rb
hopdm.rb		hopdm.rb
htqc.rb		htqc.rb
htslib.rb		htslib.rb
hyphy.rb		hyphy.rb
idcoefs.rb		idcoefs.rb
igraph.rb		igraph.rb
igv.rb		igv.rb

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