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28 changes: 28 additions & 0 deletions _posts/2023-04-01-data-science.md
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---
layout: post
title: "Statitical analysis of Microbiomes"
author: "Andrea Telatin"
categories: events
tags: [events,statistics]
image: stat.jpg
---

## What

How to use [**Benchdamic**](https://www.bioconductor.org/packages/release/bioc/html/benchdamic.html)
to analyse a microbiome dataset.

## Who

[Dr Matteo Calgaro](https://scholar.google.com/citations?user=6yCSQe8AAAAJ&hl=en)
is a bio statistician, who focussed his research on the development of statistical methods for the analysis of microbiome data.
During his PhD he evaluated the performance of different methods for the **normalization** of count tables (OTU Tables),
and then on methods for **differential abundance analysis**.

He developed the [**Benchdamic**](https://www.bioconductor.org/packages/release/bioc/html/benchdamic.html)
package to assess which methods for differentiali abundance analyses perform better on a specific dataset.

## Handsout

* [Benchdamic tutorial at QIB](https://mcalgaro93.github.io/benchdamicWorkshop/articles/introduction_to_benchdamic.html)

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---
layout: post
title: "Large Scale Analysis of Microbial Genomes"
author: "Leonardo De Oliveira Martins"
categories: events
tags: [events,large-scale]
image: large.jpg
---

## What

## Who

## Handsout
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16 changes: 9 additions & 7 deletions pages/about.md
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## Calendar

| Date | Workshop | Info |
|------------|----------------------------|--------------------------------|
| 5 March | [Machine Learning]({{ site.baseurl }}{% post_url 2023-03-01-machine-learning %}): Seminar | [Intranet](https://intranet.nbi.ac.uk/infoserv/cgi-bin/calendar/default.asp?mid=0) |
| 7 March | [Machine Learning]({{ site.baseurl }}{% post_url 2023-03-01-machine-learning %}): Workshop | [Registration (intranet)](https://intranet.nbi.ac.uk/infoserv/cgi-bin/calendar/default.asp?mid=0) |
| April | Data Science | Come back for more details... |
| May | MetaPhlAn and HuMANN | Come back for more details... |
| June (1st week) | Anvi'o Workshop | Come back for more details... |
| Date | Workshop | Info |
|-----------------|--------------------------------------------------------------------------------------------|---------------------------------------------------------------------------------------------------|
| 5 March | [Machine Learning]({{ site.baseurl }}{% post_url 2023-03-01-machine-learning %}): Seminar | [Intranet](https://intranet.nbi.ac.uk/infoserv/cgi-bin/calendar/default.asp?mid=0) |
| 7 March | [Machine Learning]({{ site.baseurl }}{% post_url 2023-03-01-machine-learning %}): Workshop | [Intranet](https://intranet.nbi.ac.uk/infoserv/cgi-bin/calendar/default.asp?mid=0) |
| 18-20 March | [nf-core hackathon]({{ site.baseurl }}{% post_url 2023-03-01-nf-core %}) | [nf-co.re](https://nf-co.re/events/2024/hackathon-march-2024/uk-norwich) |
| 26 March | [Data Science]({{ site.baseurl }}{% post_url 2023-04-01-data-science %}) | [Intranet](https://intranet.nbi.ac.uk/infoserv/cgi-bin/calendar/default.asp?id=66081) |
| April | Data Science | Come back for more details... |
| May | MetaPhlAn and HuMANN | Come back for more details... |
| June (1st week) | Anvi'o Workshop | Come back for more details... |

## Topics

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