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update authors and remove duplicate salmonella
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@andrewjpage
andrewjpage committed May 19, 2020
1 parent 15d282e commit cdf3f8f
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1 change: 1 addition & 0 deletions AUTHORS
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Andrew J. Page
Thanh Le Viet
182 changes: 0 additions & 182 deletions scagaire/data/species_to_genes.tsv
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Expand Up @@ -2849,188 +2849,6 @@ Yersinia pestis yadA 330 abricate vfdb auto 20191029
Yersinia pestis pla 277 abricate vfdb auto 20191029
Yersinia pestis yopM 142 abricate vfdb auto 20191029
Yersinia pestis (Phe)catA1 1 abricate argannot auto 20191029
Salmonella enterica mdsC 8108 abricate card auto 20191031
Salmonella enterica mdsB 8087 abricate card auto 20191031
Salmonella enterica mdsA 8159 abricate card auto 20191031
Salmonella enterica golS 8184 abricate card auto 20191031
Salmonella enterica AAC(6')-Iaa 2965 abricate card auto 20191031
Salmonella enterica sdiA 10646 abricate card auto 20191031
Salmonella enterica mdtK 10468 abricate card auto 20191031
Salmonella enterica AAC(6')-Iy 7762 abricate card auto 20191031
Salmonella enterica tet(A) 1175 abricate card auto 20191031
Salmonella enterica catII_from_Escherichia_coli_K-12 44 abricate card auto 20191031
Salmonella enterica TEM-1 888 abricate card auto 20191031
Salmonella enterica APH(3')-Ia 502 abricate card auto 20191031
Salmonella enterica dfrA12 169 abricate card auto 20191031
Salmonella enterica aadA2 483 abricate card auto 20191031
Salmonella enterica sul1 1672 abricate card auto 20191031
Salmonella enterica sul3 176 abricate card auto 20191031
Salmonella enterica cmlA1 98 abricate card auto 20191031
Salmonella enterica CMY-59 520 abricate card auto 20191031
Salmonella enterica floR 858 abricate card auto 20191031
Salmonella enterica APH(6)-Id 1992 abricate card auto 20191031
Salmonella enterica APH(3'')-Ib 1935 abricate card auto 20191031
Salmonella enterica sul2 1852 abricate card auto 20191031
Salmonella enterica ANT(3'')-IIa 364 abricate card auto 20191031
Salmonella enterica AAC(3)-VIa 169 abricate card auto 20191031
Salmonella enterica tet(B) 1380 abricate card auto 20191031
Salmonella enterica FosA7 786 abricate card auto 20191031
Salmonella enterica AAC(3)-IId 133 abricate card auto 20191031
Salmonella enterica rmtC 2 abricate card auto 20191031
Salmonella enterica dfrA1 139 abricate card auto 20191031
Salmonella enterica dfrA14 157 abricate card auto 20191031
Salmonella enterica Shigella_flexneri_chloramphenicol_acetyltransferase 897 abricate card auto 20191031
Salmonella enterica TEM-135 793 abricate card auto 20191031
Salmonella enterica OXA-1 101 abricate card auto 20191031
Salmonella enterica APH(3')-IIa 78 abricate card auto 20191031
Salmonella enterica APH(6)-Ic 57 abricate card auto 20191031
Salmonella enterica CARB-3 390 abricate card auto 20191031
Salmonella enterica aadA16 4 abricate card auto 20191031
Salmonella enterica dfrA27 4 abricate card auto 20191031
Salmonella enterica arr-3 91 abricate card auto 20191031
Salmonella enterica QnrB17 2 abricate card auto 20191031
Salmonella enterica TEM-127 4 abricate card auto 20191031
Salmonella enterica aadA7 35 abricate card auto 20191031
Salmonella enterica TEM-150 10 abricate card auto 20191031
Salmonella enterica QnrS1 147 abricate card auto 20191031
Salmonella enterica MCR-9 79 abricate card auto 20191031
Salmonella enterica aadA5 69 abricate card auto 20191031
Salmonella enterica dfrA17 67 abricate card auto 20191031
Salmonella enterica AAC(6')-33 1 abricate card auto 20191031
Salmonella enterica OXA-2 10 abricate card auto 20191031
Salmonella enterica ANT(2'')-Ia 57 abricate card auto 20191031
Salmonella enterica tet(D) 31 abricate card auto 20191031
Salmonella enterica oqxB 96 abricate card auto 20191031
Salmonella enterica oqxA 98 abricate card auto 20191031
Salmonella enterica dfrA7 634 abricate card auto 20191031
Salmonella enterica tet(C) 66 abricate card auto 20191031
Salmonella enterica TEM-168 26 abricate card auto 20191031
Salmonella enterica cmlA5 32 abricate card auto 20191031
Salmonella enterica HERA-3 15 abricate card auto 20191031
Salmonella enterica CTX-M-2 6 abricate card auto 20191031
Salmonella enterica QnrB5 62 abricate card auto 20191031
Salmonella enterica CMY-2 4 abricate card auto 20191031
Salmonella enterica dfrA15 124 abricate card auto 20191031
Salmonella enterica MCR-1 40 abricate card auto 20191031
Salmonella enterica CTX-M-32 1 abricate card auto 20191031
Salmonella enterica AAC(3)-IV 167 abricate card auto 20191031
Salmonella enterica APH(4)-Ia 166 abricate card auto 20191031
Salmonella enterica qacH 1 abricate card auto 20191031
Salmonella enterica TEM-215 1 abricate card auto 20191031
Salmonella enterica tetM 39 abricate card auto 20191031
Salmonella enterica EreA2 1 abricate card auto 20191031
Salmonella enterica dfrA5 11 abricate card auto 20191031
Salmonella enterica TEM-214 25 abricate card auto 20191031
Salmonella enterica lnuG 28 abricate card auto 20191031
Salmonella enterica dfrI 1 abricate card auto 20191031
Salmonella enterica AAC(6')-Ib7 9 abricate card auto 20191031
Salmonella enterica SAT-1 42 abricate card auto 20191031
Salmonella enterica QnrB20 21 abricate card auto 20191031
Salmonella enterica dfrA19 30 abricate card auto 20191031
Salmonella enterica AAC(6')-IIc 26 abricate card auto 20191031
Salmonella enterica SHV-160 1 abricate card auto 20191031
Salmonella enterica TEM-116 9 abricate card auto 20191031
Salmonella enterica AAC(3)-IIe 23 abricate card auto 20191031
Salmonella enterica TEM-154 1 abricate card auto 20191031
Salmonella enterica mefB 10 abricate card auto 20191031
Salmonella enterica catB2 1 abricate card auto 20191031
Salmonella enterica mphE 47 abricate card auto 20191031
Salmonella enterica msrE 47 abricate card auto 20191031
Salmonella enterica VIM-1 4 abricate card auto 20191031
Salmonella enterica dfrB1 1 abricate card auto 20191031
Salmonella enterica mphA 107 abricate card auto 20191031
Salmonella enterica cmlA6 2 abricate card auto 20191031
Salmonella enterica rmtB 7 abricate card auto 20191031
Salmonella enterica SHV-57 1 abricate card auto 20191031
Salmonella enterica QnrD1 4 abricate card auto 20191031
Salmonella enterica TEM-30 1 abricate card auto 20191031
Salmonella enterica KPC-1 2 abricate card auto 20191031
Salmonella enterica dfrA8 13 abricate card auto 20191031
Salmonella enterica CTX-M-14 13 abricate card auto 20191031
Salmonella enterica QnrA1 4 abricate card auto 20191031
Salmonella enterica AAC(3)-Id 22 abricate card auto 20191031
Salmonella enterica tetO 2 abricate card auto 20191031
Salmonella enterica FOX-5 1 abricate card auto 20191031
Salmonella enterica SHV-2A 2 abricate card auto 20191031
Salmonella enterica QnrB69 2 abricate card auto 20191031
Salmonella enterica FosA4 13 abricate card auto 20191031
Salmonella enterica TEM-176 9 abricate card auto 20191031
Salmonella enterica aadA15 1 abricate card auto 20191031
Salmonella enterica CTX-M-8 6 abricate card auto 20191031
Salmonella enterica qnrE1 14 abricate card auto 20191031
Salmonella enterica dfrA25 7 abricate card auto 20191031
Salmonella enterica OXA-4 7 abricate card auto 20191031
Salmonella enterica QnrB4 5 abricate card auto 20191031
Salmonella enterica DHA-6 3 abricate card auto 20191031
Salmonella enterica MCR-5 3 abricate card auto 20191031
Salmonella enterica catB3 86 abricate card auto 20191031
Salmonella enterica NDM-9 1 abricate card auto 20191031
Salmonella enterica determinant_of_bleomycin_resistance 8 abricate card auto 20191031
Salmonella enterica FosA3 68 abricate card auto 20191031
Salmonella enterica CTX-M-65 22 abricate card auto 20191031
Salmonella enterica QnrS2 7 abricate card auto 20191031
Salmonella enterica CTX-M-15 21 abricate card auto 20191031
Salmonella enterica APH(3')-IIIa 2 abricate card auto 20191031
Salmonella enterica AAC(3)-Ia 5 abricate card auto 20191031
Salmonella enterica CTX-M-27 2 abricate card auto 20191031
Salmonella enterica AAC(2')-IIa 8 abricate card auto 20191031
Salmonella enterica QnrB44 3 abricate card auto 20191031
Salmonella enterica SHV-134 25 abricate card auto 20191031
Salmonella enterica CTX-M-55 59 abricate card auto 20191031
Salmonella enterica linG 47 abricate card auto 20191031
Salmonella enterica NDM-5 3 abricate card auto 20191031
Salmonella enterica armA 46 abricate card auto 20191031
Salmonella enterica VEB-5 1 abricate card auto 20191031
Salmonella enterica dfrA10 2 abricate card auto 20191031
Salmonella enterica TEM-206 2 abricate card auto 20191031
Salmonella enterica TEM-155 1 abricate card auto 20191031
Salmonella enterica TEM-79 1 abricate card auto 20191031
Salmonella enterica TEM-104 1 abricate card auto 20191031
Salmonella enterica TEM-57 5 abricate card auto 20191031
Salmonella enterica TEM-106 2 abricate card auto 20191031
Salmonella enterica CTX-M-9 2 abricate card auto 20191031
Salmonella enterica catII 1 abricate card auto 20191031
Salmonella enterica ACC-1 4 abricate card auto 20191031
Salmonella enterica APH(2'')-IIa 1 abricate card auto 20191031
Salmonella enterica AAC(6')-Im 1 abricate card auto 20191031
Salmonella enterica SHV-2 1 abricate card auto 20191031
Salmonella enterica dfrA32 1 abricate card auto 20191031
Salmonella enterica TEM-12 2 abricate card auto 20191031
Salmonella enterica aadA8b 1 abricate card auto 20191031
Salmonella enterica arr-2 40 abricate card auto 20191031
Salmonella enterica dfrA23 3 abricate card auto 20191031
Salmonella enterica TEM-33 1 abricate card auto 20191031
Salmonella enterica catI 1 abricate card auto 20191031
Salmonella enterica TEM-19 1 abricate card auto 20191031
Salmonella enterica MCR-3 3 abricate card auto 20191031
Salmonella enterica QnrB6 2 abricate card auto 20191031
Salmonella enterica AAC(6')-Il 1 abricate card auto 20191031
Salmonella enterica Erm(42) 3 abricate card auto 20191031
Salmonella enterica TEM-141 1 abricate card auto 20191031
Salmonella enterica NDM-7 1 abricate card auto 20191031
Salmonella enterica OXA-9 6 abricate card auto 20191031
Salmonella enterica NDM-1 4 abricate card auto 20191031
Salmonella enterica QepA2 8 abricate card auto 20191031
Salmonella enterica SHV-66 2 abricate card auto 20191031
Salmonella enterica APH(3')-VI 1 abricate card auto 20191031
Salmonella enterica APH(3')-VIa 1 abricate card auto 20191031
Salmonella enterica ErmB 6 abricate card auto 20191031
Salmonella enterica cmlA4 4 abricate card auto 20191031
Salmonella enterica tet(E) 4 abricate card auto 20191031
Salmonella enterica rmtE 4 abricate card auto 20191031
Salmonella enterica CTX-M-137 1 abricate card auto 20191031
Salmonella enterica DHA-15 2 abricate card auto 20191031
Salmonella enterica CTX-M-1 3 abricate card auto 20191031
Salmonella enterica dfrA21 1 abricate card auto 20191031
Salmonella enterica CTX-M-123 39 abricate card auto 20191031
Salmonella enterica lnuF 1 abricate card auto 20191031
Salmonella enterica baeR 1 abricate card auto 20191031
Salmonella enterica TEM-40 1 abricate card auto 20191031
Salmonella enterica aadA4 2 abricate card auto 20191031
Salmonella enterica TEM-54 1 abricate card auto 20191031
Salmonella enterica CTX-M-3 1 abricate card auto 20191031
Salmonella enterica evgS 1 abricate card auto 20191031
Salmonella enterica SHV-13 1 abricate card auto 20191031
Klebsiella pneumoniae FosA6 6526 abricate card auto 20191101
Klebsiella pneumoniae Klebsiella_pneumoniae_acrA 7942 abricate card auto 20191101
Klebsiella pneumoniae Klebsiella_pneumoniae_OmpK37 7420 abricate card auto 20191101
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