v1.1.0 docs (updated xrt example).

pyxu-org · Nov 2, 2023 · b47ed48 · b47ed48
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diff --git a/WARNINGS.log b/WARNINGS.log
@@ -1,7 +1,7 @@
 [91m/root/HOST/doc/examples/xray.ipynb:11: WARNING: File not found: 'intro/tomo.html'[39;49;00m
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-[91m/root/HOST/doc/examples/xray.ipynb:1524: WARNING: File not found: 'api/experimental/xray.html#pyxu.experimental.xray.XRayTransform'[39;49;00m
+[91m/root/HOST/doc/examples/xray.ipynb:1636: WARNING: File not found: 'api/experimental/xray.html#pyxu.experimental.xray.XRayTransform'[39;49;00m
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@@ -15,8 +15,6 @@
 [91m/root/HOST/doc/references.rst:21: WARNING: Citation [SubGauss] is not referenced.[39;49;00m
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 [91m/root/HOST/src/pyxu/experimental/xray/_xray.py:docstring of pyxu.experimental.xray._xray.XRayTransform.init:34: WARNING: py:class reference target not found: list(dict)[39;49;00m
-[91m/root/HOST/src/pyxu/experimental/xray/_xray.py:docstring of pyxu.experimental.xray._xray.XRayTransform.init:35: WARNING: py:class reference target not found: pyxu.experimental.xray._rt.RayXRT[39;49;00m
-[91m/root/HOST/src/pyxu/experimental/xray/_xray.py:docstring of pyxu.experimental.xray._xray.XRayTransform.init:35: WARNING: py:class reference target not found: pyxu.experimental.xray._fourier.FourierXRT[39;49;00m
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diff --git a/_downloads/09b83b84e67dd3bf3bfa9889ef5464d2/linop-5.pdf b/_downloads/09b83b84e67dd3bf3bfa9889ef5464d2/linop-5.pdf
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diff --git a/_downloads/38abfa68484834f661723510290a9594/sampler-1_01_00.pdf b/_downloads/38abfa68484834f661723510290a9594/sampler-1_01_00.pdf
diff --git a/_downloads/3b75210a4ac872e658bfc6fd21a99402/linop-18.pdf b/_downloads/3b75210a4ac872e658bfc6fd21a99402/linop-18.pdf
diff --git a/_downloads/46ba4351fee97ccd2e3d0aba89e7413d/linop-14.pdf b/_downloads/46ba4351fee97ccd2e3d0aba89e7413d/linop-14.pdf
diff --git a/_downloads/5420c90dcdf9b097dbed8ebf47bc7a03/util-2.pdf b/_downloads/5420c90dcdf9b097dbed8ebf47bc7a03/util-2.pdf
diff --git a/_downloads/560a032bc91f7b9a1ef98f5bf83ef609/xray-1.py b/_downloads/560a032bc91f7b9a1ef98f5bf83ef609/xray-1.py
@@ -0,0 +1,17 @@
+import numpy as np
+import pyxu.experimental.xray as pxr
+
+op = pxr.XRayTransform.init(
+    arg_shape=(5, 6),
+    origin=0,
+    pitch=1,
+    method="ray-trace",
+    n_spec=np.array([[1   , 0   ],  # 3 rays ...
+                     [0.5 , 0.5 ],
+                     [0.75, 0.25]]),
+    t_spec=np.array([[2.5, 3],  # ... all defined w.r.t volume center
+                     [2.5, 3],
+                     [2.5, 3]]),
+)
+fig = op.diagnostic_plot()
+fig.show()
diff --git a/_downloads/5be70851f96b004b61b84e14faba6d02/util-1.pdf b/_downloads/5be70851f96b004b61b84e14faba6d02/util-1.pdf
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diff --git a/_downloads/727cebf6c294705854011009653ef8e1/opt-solver-3.pdf b/_downloads/727cebf6c294705854011009653ef8e1/opt-solver-3.pdf
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diff --git a/_downloads/7bf4f564a15100201d0a1e7baafafa52/opt-solver-2.pdf b/_downloads/7bf4f564a15100201d0a1e7baafafa52/opt-solver-2.pdf
diff --git a/_downloads/7e303bcea52ca3c5394f257adec0de83/xray-1.png b/_downloads/7e303bcea52ca3c5394f257adec0de83/xray-1.png
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diff --git a/_downloads/b793257364ec7e73fe09d6ac0cf897bb/linop-3.pdf b/_downloads/b793257364ec7e73fe09d6ac0cf897bb/linop-3.pdf
diff --git a/_downloads/be401646c421e812b3d51f80abfa8011/xray-1.pdf b/_downloads/be401646c421e812b3d51f80abfa8011/xray-1.pdf
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diff --git a/_downloads/c6700c20988494320e4fca76fe07c2f7/linop-16.pdf b/_downloads/c6700c20988494320e4fca76fe07c2f7/linop-16.pdf
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diff --git a/_downloads/db9ac5fbbfe21a45f644cc919f758da2/opt-solver-1.pdf b/_downloads/db9ac5fbbfe21a45f644cc919f758da2/opt-solver-1.pdf
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diff --git a/_downloads/f32070409f4c8c535a15508855b9e463/linop-21_02.pdf b/_downloads/f32070409f4c8c535a15508855b9e463/linop-21_02.pdf
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diff --git a/_downloads/fd4ec1dae59f3f8ce46dd8ad9d29ad84/linop-12_00.pdf b/_downloads/fd4ec1dae59f3f8ce46dd8ad9d29ad84/linop-12_00.pdf
diff --git a/_images/examples_xray_11_0.png b/_images/examples_xray_11_0.png
diff --git a/_images/examples_xray_13_1.png b/_images/examples_xray_13_1.png
diff --git a/_images/examples_xray_18_0.png b/_images/examples_xray_18_0.png
diff --git a/_images/examples_xray_18_1.png b/_images/examples_xray_18_1.png
diff --git a/_images/examples_xray_18_2.png b/_images/examples_xray_18_2.png
diff --git a/_images/examples_xray_20_1.png b/_images/examples_xray_20_1.png
diff --git a/_images/examples_xray_25_0.png b/_images/examples_xray_25_0.png
diff --git a/_images/examples_xray_27_1.png b/_images/examples_xray_27_1.png
diff --git a/_images/examples_xray_5_1.png b/_images/examples_xray_5_1.png
diff --git a/_images/examples_xray_9_0.png b/_images/examples_xray_9_0.png
diff --git a/_images/sampler-1_00_00.png b/_images/sampler-1_00_00.png
diff --git a/_images/sampler-1_01_00.png b/_images/sampler-1_01_00.png
diff --git a/_images/xray-1.png b/_images/xray-1.png
diff --git a/_modules/index.html b/_modules/index.html
@@ -455,7 +455,8 @@ <h1>All modules for which code is available</h1>
 <li><a href="pyxu/abc/solver.html">pyxu.abc.solver</a></li>
 <li><a href="pyxu/experimental/sampler/_sampler.html">pyxu.experimental.sampler._sampler</a></li>
 <li><a href="pyxu/experimental/sampler/statistics.html">pyxu.experimental.sampler.statistics</a></li>
-<li><a href="pyxu/experimental/xray/_kernel.html">pyxu.experimental.xray._kernel</a></li>
+<li><a href="pyxu/experimental/xray/_fourier.html">pyxu.experimental.xray._fourier</a></li>
+<li><a href="pyxu/experimental/xray/_rt.html">pyxu.experimental.xray._rt</a></li>
 <li><a href="pyxu/experimental/xray/_xray.html">pyxu.experimental.xray._xray</a></li>
 <li><a href="pyxu/info/deps.html">pyxu.info.deps</a></li>
 <li><a href="pyxu/info/warning.html">pyxu.info.warning</a></li>
@@ -481,6 +482,7 @@ <h1>All modules for which code is available</h1>
 <li><a href="pyxu/operator/linop/stencil/_stencil.html">pyxu.operator.linop.stencil._stencil</a></li>
 <li><a href="pyxu/operator/linop/stencil/stencil.html">pyxu.operator.linop.stencil.stencil</a></li>
 <li><a href="pyxu/operator/map/base.html">pyxu.operator.map.base</a></li>
+<li><a href="pyxu/operator/map/kernel.html">pyxu.operator.map.kernel</a></li>
 <li><a href="pyxu/operator/map/ufunc.html">pyxu.operator.map.ufunc</a></li>
 <li><a href="pyxu/opt/solver/adam.html">pyxu.opt.solver.adam</a></li>
 <li><a href="pyxu/opt/solver/cg.html">pyxu.opt.solver.cg</a></li>