NEP29 for June 2024 #1518
Workflow file for this run
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Pytest with Flake8 | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest", "macos-latest", "windows-latest"] | |
| python-version: ["3.11", "3.12"] | |
| numpy_ver: ["latest"] | |
| test_config: ["latest"] | |
| include: | |
| - python-version: "3.10" | |
| numpy_ver: "1.24" | |
| os: ubuntu-latest | |
| test_config: "NEP29" | |
| - python-version: "3.6.8" | |
| numpy_ver: "1.19.5" | |
| os: "ubuntu-20.04" | |
| test_config: "Ops" | |
| name: Python ${{ matrix.python-version }} on ${{ matrix.os }} with numpy ${{ matrix.numpy_ver }} | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Reinstall fortran on MacOS | |
| if: ${{ matrix.os == 'macos-latest' }} | |
| run: brew reinstall gcc | |
| - name: Install Operational dependencies | |
| if: ${{ matrix.test_config == 'Ops'}} | |
| run: | | |
| sudo apt-get install libhdf5-serial-dev netcdf-bin libnetcdf-dev | |
| pip install --no-cache-dir numpy==${{ matrix.numpy_ver }} | |
| pip install "cdflib<1.0" | |
| pip install -r requirements.txt | |
| pip install -r test_requirements.txt | |
| cd .. | |
| git clone https://github.com/pysat/pysat.git | |
| cd pysat | |
| git checkout pip_rc_install | |
| python setup.py develop | |
| cd ../pysatNASA | |
| pip install . | |
| - name: Install NEP29 dependencies | |
| if: ${{ matrix.test_config == 'NEP29'}} | |
| run: | | |
| pip install numpy==${{ matrix.numpy_ver }} | |
| pip install --upgrade-strategy only-if-needed .[test] | |
| - name: Install standard dependencies | |
| if: ${{ matrix.test_config == 'latest'}} | |
| run: | | |
| pip install .[test] | |
| - name: Set up pysat | |
| run: | | |
| mkdir pysatData | |
| python -c "import pysat; pysat.params['data_dirs'] = 'pysatData'" | |
| - name: Test PEP8 compliance | |
| run: flake8 . --count --select=D,E,F,H,W --show-source --statistics | |
| - name: Evaluate complexity | |
| run: flake8 . --count --exit-zero --max-complexity=10 --statistics | |
| - name: Test with pytest | |
| run: pytest | |
| - name: Coveralls Parallel (Ubuntu) | |
| if: startsWith(matrix.os, 'ubuntu') | |
| env: | |
| COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }} | |
| COVERALLS_PARALLEL: true | |
| run: | | |
| curl -sL https://coveralls.io/coveralls-linux.tar.gz | tar -xz | |
| ./coveralls report --parallel --repo-token=${{ secrets.COVERALLS_REPO_TOKEN }} --build-number ${{ github.run_number }} | |
| - name: Coveralls Parallel (Windows) | |
| if: startsWith(matrix.os, 'windows') | |
| env: | |
| COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }} | |
| COVERALLS_PARALLEL: true | |
| run: | | |
| curl -L https://github.com/coverallsapp/coverage-reporter/releases/latest/download/coveralls-windows.exe -o coveralls.exe | |
| ./coveralls.exe report --parallel --repo-token=${{ secrets.COVERALLS_REPO_TOKEN }} --build-number ${{ github.run_number }} | |
| - name: Coveralls Parallel (MacOS) | |
| if: startsWith(matrix.os, 'macos') | |
| env: | |
| COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }} | |
| COVERALLS_PARALLEL: true | |
| run: | | |
| brew tap coverallsapp/coveralls --quiet | |
| brew install coveralls --quiet | |
| ls -lh .coverage | |
| ls -lh coverage.xml | |
| coveralls report coverage.xml --format=cobertura --verbose --parallel --repo-token=${{ secrets.COVERALLS_REPO_TOKEN }} --build-number ${{ github.run_number }} --debug --dry-run | |
| finish: | |
| name: Finish Coverage Analysis | |
| needs: build | |
| if: always() | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - name: Coveralls Finish | |
| env: | |
| COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }} | |
| COVERALLS_PARALLEL: true | |
| run: | | |
| curl -sL https://coveralls.io/coveralls-linux.tar.gz | tar -xz | |
| ./coveralls done --build-number ${{ github.run_number }} |